Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01592 ATGAATCGCAGCTTCCGAGCACCGGAATCGCCAATGCAAGCTGCGTTCAAGCAGAGGCACCAGCAATTGGGGACTCTCAGCTCCTCTCCGCGCCTCATCGACAGGGATGACGAGCTCGCCTTGTTCCTCGAAATGCGCAACCGCGAGAAGGAGCACTACGATTCTTTGCTTCGCGCCGCCGAGGAAGCCGACGCTGCAGCATTAGGCAATTCTCTCTTTAGCGTTCCGTCGGCGCGGAAGACCGGTGCTGATGATTTTCTCAATTCGGAAAATGATAAGAATGACTACGAATGGCTTCTATCCCCACCTGGGACTCCCCTTTTTCCTTCTCTGGAGATGGAAACAACAAAAACTGTTATGAGTCGGCTTGGAGCTCCAACTGTACGTTCCACATCATTAAAAGCTAGATTGGCAAATCCTCCGTCAGAACATACTGGAAGGAGGAGCAACATGGTATCCAAACAAACCGCCTCCTCCCCTGGGTTGACCTCTTCAGGTGGTGGAATTAGGAGGCCCTCATCATCAGGGAACCTGTTAGAACTTGCTGGAAGGAGCAACTTAGTATCTAGACAACCAGCCTCCTCCCCTGGGTTGACCTCTTCAGGTGGTGGAACTAGGAGGCCCTCATCATCAGGGAATCTGGGATCAAGATCTGCAACTCCTACTGGACGACCTACATTGTCCACAGTTTCAAAATCATCTAGACCTTCAACACCTACTTCTCGGACAACCATACCTTCGACTAGGACAATGGTAGCTACCACCAAGACCTCAGTTTCCTCAGCCAAGCCGGTGGTTTCTTCATCTAAGACTGCAGTTTCTGTCAGTAAGACAACTACAGTGCCGGCAACTAAAACCACAATTCCATCTAGATCCTCTACACCTCTGTCAAGATCTACTGCAAGATCTTCAACACCAACAACCAGGCCTACCTTACCAGCATCCAGGTCTACATCAAGGTCATCAACCCCAACTCGGCGACCATCAACACCATCAAATGTACCCACTGTATCTGCTCCTTCAGTTAAGACATCTTCAATCTCCAAGTCAGCTCCTGTGATGTCAAGGCAGGCAGTACCATCATCACCTGGCCCTTCACCAACAGTAAAATCAAGGCCATGGAAGCCATCTGAGATGCCTGGCTTTTCACTTGACGCTCCACCCAATTTGAGGACAACGCTTCCAGAAAGACCACTGTCAACAACTAGGGGGAGGCCTGGAGCCCCCAGTCCACGGTCTTCGTCTGTTGATCCTGCTTTCAGTGGTAGACCAAGACGACAATCATGCTCTCCTTCTAGAGGACGTTCCTCCAATGGCATTTCTCATCCAACTGGAAGCTCTATGCCTGCCGTTAATCGTACATACTCCAAAGCGAATGAAAATGTCAGTCCTGTTGTAATGGGCACCAAAATGGTTGAGAGGATGATAAATATGCGGAAACTAGCACCACCAAGGTTGGATAACAGGAACCCTTCCCATAATCTTTCTGGCAAGTCGTCATCATCTCCAGATAGCTCTGGTTTTGGAAGATCACTCTCAAAGAAATCCTTGGATATGGCTATTAGGCATATGGATATAAGGCGAAGGGTTCCAGGCAATATACGGCCATCGATGACAAACATTCCAGCATCTTCAATGTATAGTGTGAGGTCTGGGCCTCAGCGGAGCAGAACTGTTAGTATCTCGGGCTCTCCTCACGCCACTAGCAGTAATGCTAGTTCTGAAGTGAGTGTAAACCAAAATGGTCTTTGTTTAGATAATAGTGAAATAGATGATGATATTGTCAGTGAGAGAGGTGGTCAATCTCCTGCAAGTGTGCGGGGTAGATAA 1830 0.488 MNRSFRAPESPMQAAFKQRHQQLGTLSSSPRLIDRDDELALFLEMRNREKEHYDSLLRAAEEADAAALGNSLFSVPSARKTGADDFLNSENDKNDYEWLLSPPGTPLFPSLEMETTKTVMSRLGAPTVRSTSLKARLANPPSEHTGRRSNMVSKQTASSPGLTSSGGGIRRPSSSGNLLELAGRSNLVSRQPASSPGLTSSGGGTRRPSSSGNLGSRSATPTGRPTLSTVSKSSRPSTPTSRTTIPSTRTMVATTKTSVSSAKPVVSSSKTAVSVSKTTTVPATKTTIPSRSSTPLSRSTARSSTPTTRPTLPASRSTSRSSTPTRRPSTPSNVPTVSAPSVKTSSISKSAPVMSRQAVPSSPGPSPTVKSRPWKPSEMPGFSLDAPPNLRTTLPERPLSTTRGRPGAPSPRSSSVDPAFSGRPRRQSCSPSRGRSSNGISHPTGSSMPAVNRTYSKANENVSPVVMGTKMVERMINMRKLAPPRLDNRNPSHNLSGKSSSSPDSSGFGRSLSKKSLDMAIRHMDIRRRVPGNIRPSMTNIPASSMYSVRSGPQRSRTVSISGSPHATSSNASSEVSVNQNGLCLDNSEIDDDIVSERGGQSPASVRGR 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01592 609 PANTHER GASTRIC MUCIN-LIKE PROTEIN 1 178 - -
Cca05g01592 609 PANTHER GASTRIC MUCIN-LIKE PROTEIN 211 609 - -
Cca05g01592 609 PANTHER GASTRIC MUCIN-LIKE PROTEIN 181 212 - -
Cca05g01592 609 MobiDBLite consensus disorder prediction 489 512 - -
Cca05g01592 609 PANTHER PROTEIN, PUTATIVE-RELATED 181 212 - -
Cca05g01592 609 PANTHER PROTEIN, PUTATIVE-RELATED 1 178 - -
Cca05g01592 609 PANTHER PROTEIN, PUTATIVE-RELATED 211 609 - -
Cca05g01592 609 MobiDBLite consensus disorder prediction 125 451 - -
Cca05g01592 609 MobiDBLite consensus disorder prediction 482 512 - -
Cca05g01592 609 MobiDBLite consensus disorder prediction 537 586 - -
Cca05g01592 609 MobiDBLite consensus disorder prediction 406 451 - -
Cca05g01592 609 MobiDBLite consensus disorder prediction 532 609 - -
Cca05g01592 609 MobiDBLite consensus disorder prediction 125 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01592 Cca-Chr5 35183350 35189793 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01592 - - vra:106765292 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01592 05 35183350 35189793 Cca05g01592 05 35183350 35189793 ECH
Cca01g00311 01 3421385 3427434 Cca05g01592 05 35183350 35189793 PCT