Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00311 ATGAATCGTAGTTTCAGGGCTCAGGAATCGCAAATGCACTCTGCGTTGAAGCAGAGGGAGCAGCAATTTGGGGCTTTGAGGGCTTCGGTGAGGAAGGAGAAGGAGGAGGAACTCGCATTGTTTCTGGAGATGAAGAAGCGCGAGAAGGAGCGGAATGATCTTCTGCTAAACAGCTCTGAGGAGTTCGATGCACCTCTCGGGTCGAATGCGGGCACGAACCCCATATTTAACATTTCTTCTTCCACGCCAGCTCCTGTGCGGAAGACTGGTGTTGATGATTTTCTCAATTCGGAAAATGATAAGAATGACTATGACTGGCTTCTAACTCCTCCCGGTACTCCTCTTTTTCCTTCTTTGGAAATGGAAAGTCGAAAAACTGTTATGAGTCAGCTTGGTACTCCAACCGCACGTCCTGTAGCATTAAAATCCAGGTTAGCAAATCATCAATCTGAGCCTGTTGGGAGGACAAATTTAGTATCTAAACAAGCTATTTCCTCTCCTGGGCTGAGTTCTTCAAGTGTTGGAACTAGGAGGCCGTCATCATCAGGGGGGCCAGGATCACGACCTGCAACTCCTACTGGGCGCCCTACATTAACTGCAACTTCAAAATCATCAAGACCTTCGACACCTACACGATCTACCTTACCTTCAACTAGGTCCATGGCAGCTACATCCAAGACCCCAACTTCCACCATCAAGCCTGCAGTTTCTGCCACTAAGCCTTTGACTTCTGCCACTAAGACTTCAGTCCCTGCAGCTAAACCCACTATTCCATCGAGATCATCTACACCTTTGTCAAGATCTGCTGCAAGATCTTCAACACCAACTAGCAGGCCTACTTTACCTCCTTCCAGGTCCACATCAAGAGCTTCTACTCCAACCCGGCGACCATCTTTACCATCAAGTGAACCCAGTATATCTGCTTCTTCAGTTAAAGCTTCTTTGAGCCCCAAGCCAGCTACTATAACATCAAGGCAGCCAACTCCTGTGACGACAAGAAAGCCAGCTCCTGTGAACTCGAGGCAGCCTGCAGCACCATCACGTGGAACTTCGCCAACAATGAGATCAAGACCATGGAAGCCATCTGAGATGCCCGGTTTTTCACTTGACGCTCCACCTAATTTGAGAACTACATTACCTGAAAGGCCATTGTCAGCAACTAGGGGCAGGCCTGGAGCACCCTCTTCCCGGTCTTCGTCTGTTGAGCCTTCTTCTAGTGGAAGACCCAGGCGACAATCATGTTCTCCTTCAAGAGGAAGAGCTTCCAATGGCACTGTTCATATCAGTGGAAACTCTGTGCCGGCAGTTAGTCGTTTGCACTCCAAAGCGAATGATAATGTCAGTCCTGTTGTAATCGGCACAAAAATGGTTGAGAGGGTAATAAATATGCGGAAACTAGCACCTCCAATGATTGATGACAAAAACTCTCCCCGTAGTAATCTGTCTGGCAAGTCAGCTTCATCTCCAGATAGCTCAGGTTTTGGAAGAACACTTTCAAAGAAGTCCTTGGACATGGCGATTAGGCACATGGATATAAGGAGAACCATTCCAGGCAATTTACGGCCACTAATGACAAATATTCCGGCATCTTCTTTGTATAGCGTGAGGTCTGGATCTCATCATGGGCGAACAATTAGTGTTTCAGGCTCTCCTCATGCCACGAGCAGTAATGCTAGTTCTGAAGTGAGTGTAAACCAAAATGGTCTTTGTTTAGATAACAGCGAAGTAGATGATGAAATTGGTAGCGAGAGATGTGGTCAATCCCCTGCCAGCGTACGGGGCAGGTAA 1788 0.476 MNRSFRAQESQMHSALKQREQQFGALRASVRKEKEEELALFLEMKKREKERNDLLLNSSEEFDAPLGSNAGTNPIFNISSSTPAPVRKTGVDDFLNSENDKNDYDWLLTPPGTPLFPSLEMESRKTVMSQLGTPTARPVALKSRLANHQSEPVGRTNLVSKQAISSPGLSSSSVGTRRPSSSGGPGSRPATPTGRPTLTATSKSSRPSTPTRSTLPSTRSMAATSKTPTSTIKPAVSATKPLTSATKTSVPAAKPTIPSRSSTPLSRSAARSSTPTSRPTLPPSRSTSRASTPTRRPSLPSSEPSISASSVKASLSPKPATITSRQPTPVTTRKPAPVNSRQPAAPSRGTSPTMRSRPWKPSEMPGFSLDAPPNLRTTLPERPLSATRGRPGAPSSRSSSVEPSSSGRPRRQSCSPSRGRASNGTVHISGNSVPAVSRLHSKANDNVSPVVIGTKMVERVINMRKLAPPMIDDKNSPRSNLSGKSASSPDSSGFGRTLSKKSLDMAIRHMDIRRTIPGNLRPLMTNIPASSLYSVRSGSHHGRTISVSGSPHATSSNASSEVSVNQNGLCLDNSEVDDEIGSERCGQSPASVRGR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00311 595 MobiDBLite consensus disorder prediction 391 431 - -
Cca01g00311 595 MobiDBLite consensus disorder prediction 539 595 - -
Cca01g00311 595 MobiDBLite consensus disorder prediction 1 20 - -
Cca01g00311 595 PANTHER GASTRIC MUCIN-LIKE PROTEIN 1 183 - -
Cca01g00311 595 PANTHER GASTRIC MUCIN-LIKE PROTEIN 183 595 - -
Cca01g00311 595 MobiDBLite consensus disorder prediction 539 572 - -
Cca01g00311 595 MobiDBLite consensus disorder prediction 475 497 - -
Cca01g00311 595 MobiDBLite consensus disorder prediction 147 431 - -
Cca01g00311 595 PANTHER PROTEIN, PUTATIVE-RELATED 1 183 - -
Cca01g00311 595 PANTHER PROTEIN, PUTATIVE-RELATED 183 595 - -
Cca01g00311 595 Coils Coil 31 52 - -
Cca01g00311 595 MobiDBLite consensus disorder prediction 149 357 - -
Cca01g00311 595 MobiDBLite consensus disorder prediction 1 18 - -
Cca01g00311 595 MobiDBLite consensus disorder prediction 468 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00311 Cca-Chr1 3421385 3427434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00311 - - gmx:100783818 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00311 01 3421385 3427434 Cca05g01592 05 35183350 35189793 PCT