Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01563 ATGTCTGCTTATGGCCATCAAATGGAGCAGATGTATTCAGCACAGAGTCTCTCAGGTGGTTCTGAGTTGAGGAGGAGCAGTTTTGCGCTGGAATCAGGATTCTACATCACATCCTTTGCTGCAACCATCTTTGTTGCTGCATTAGCTGCTCTTGGGCTTTTATTAATTACTTTATTGATTTCACTGGCAATGATGCTGCAATCTTGTCAAAGTAGCCATGCTGGAGTTATTGAGGTTCAGAATATACATGATGAGTACAGTTATTGCAAGGTTTATTCTCTTCATGCTAAGCTCAATAACTTGGAAGGGCATAATTTTCCTAACCACTGCAAGGACCTGGCCATACAGTATATCAAGGGAGGTCAATATGCTAGAGACTTGGATTCAACCAAGTCTGTGATTGAGGATTACTTCAACAGTGTTAGACCATCAGATGATGGTCTTGATGTGGTGTTGTTAGACATAGATGGCATCTTTTCACCAAATCCTCATTCTTCCAATTTGTTTCAAAGCAGCAATAACAATTGTGTCCTAGAGGCAAAGAAGTTAAAGCGCATGCTTCTTTTAAGAATATACACGAACCTTCAAGCTGGTGGATGGTCTATAATTTTGTTATCAAGAGAGCATGGAACACACCAAAATGTCACCATCAACCGTCTTGTCTCTGCTGGATTTAGAAATTGGTCTTCCTTGGTGATGAGTTTAGAAGATGAAGATTCCACTAAAGGGAATGAGAATTTTTCTAGGCAAAGGAATGTGATACAGACGAAGGGCTACCGCCTAAAAAGTATGATCAGCAGTCAAATGGATGCTTTGGCAGTTGTAGATAGAGAAATAAGATTTTTTTGGCTTCCGGACCCTATATTTGACGTGTTTGAGCAAGCAAAGGAGAACATAGGTGCTGGATATTAA 912 0.4024 MSAYGHQMEQMYSAQSLSGGSELRRSSFALESGFYITSFAATIFVAALAALGLLLITLLISLAMMLQSCQSSHAGVIEVQNIHDEYSYCKVYSLHAKLNNLEGHNFPNHCKDLAIQYIKGGQYARDLDSTKSVIEDYFNSVRPSDDGLDVVLLDIDGIFSPNPHSSNLFQSSNNNCVLEAKKLKRMLLLRIYTNLQAGGWSIILLSREHGTHQNVTINRLVSAGFRNWSSLVMSLEDEDSTKGNENFSRQRNVIQTKGYRLKSMISSQMDALAVVDREIRFFWLPDPIFDVFEQAKENIGAGY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01563 303 Gene3D - 84 296 IPR023214 -
Cca05g01563 303 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 84 290 IPR005519 -
Cca05g01563 303 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 22 295 - -
Cca05g01563 303 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 22 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01563 Cca-Chr5 34809651 34812940 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01563 - - gmx:100802632 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01563 05 34809651 34812940 Cca05g01563 05 34809651 34812940 ECH
Cca01g00332 01 3798637 3801445 Cca05g01563 05 34809651 34812940 PCT