Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00332 ATGTCTGCTTATGCTCATCAAATGGAACAGCAGTACTCTGCACACGGTCTCTCGGATGATTCTGATACGGGAAGCCATTATGAGCTAGAATCAGGATTCTACATGAAATCTTTTACCGCAACAATCTTTGTTGCTTCACTTGTCACCCTTGGAGTTCTACTGATTACTTTGGTGATTTCCTTGGTGATTATGCTGCAATCCTGTCAAAGTAAAACCACCGGAGTTATCGAGCTTCTGAATATAAATGACTATTACAGTTATTGCAGAGTGTATTCTCTGCATGCTGAGATCAATAACTTAGAAGGATATAATCTTCCTAAAATCTGCAGAGACCTGGATGTACACTATATCAAAGGAGGTCAATATGCTAGAGAGTTGGATTTGACTATGTCTGTGGTTGATGATTACTTCAAGAGTGTAAGACCTTCAGAGGATGGTTTGGATGTAGTTTTGATGGACATAGATGACATTTTTCCTCGGAATTCTTATTCTTCCAATTCGTTTCTCAGGTTTTACAATGGCAGCACTAGCAACTGTATTGAAGAGGCAAAAAATGTAAAACTCATGTTTGTTTCTAGATTATACATGTACCTTCAAACCGGTGGATGGTCTATAATTCTGTTATCAAGAGAGCCTGGAACACGCCGAAATGTAACCATTAATCATCTTGACTCTGCGGGATTAAGAAGTTGGTCTGCCTTGATGATGAGAGCAGAAGATTCAGATCCTACCAAAGGGTATGAGTACTTTTCTATGCAAAGGAATGTGATAAGGAAGAAGGGCTTCCGAATAAAATGTATCATAAGCAGCCATATGGATGCCATTACCATTCCAGAGACCGGAGTGCGAAATTTTTTGCTTCCAAACACTCTATGTGACAAGTTTGAGAAGTAG 894 0.3937 MSAYAHQMEQQYSAHGLSDDSDTGSHYELESGFYMKSFTATIFVASLVTLGVLLITLVISLVIMLQSCQSKTTGVIELLNINDYYSYCRVYSLHAEINNLEGYNLPKICRDLDVHYIKGGQYARELDLTMSVVDDYFKSVRPSEDGLDVVLMDIDDIFPRNSYSSNSFLRFYNGSTSNCIEEAKNVKLMFVSRLYMYLQTGGWSIILLSREPGTRRNVTINHLDSAGLRSWSALMMRAEDSDPTKGYEYFSMQRNVIRKKGFRIKCIISSHMDAITIPETGVRNFLLPNTLCDKFEK 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00332 297 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 84 290 IPR005519 -
Cca01g00332 297 Gene3D - 83 294 IPR023214 -
Cca01g00332 297 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 16 296 - -
Cca01g00332 297 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 16 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00332 Cca-Chr1 3798637 3801445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00332 - - gmx:100798657 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00332 01 3798637 3801445 Cca05g01563 05 34809651 34812940 PCT