Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01531 ATGGAGGTCTTGGATCCTTCTCGAAGCTTCATGAGAAACGTGAAGCGCGTGATCATCAAGGTCGGCACCGCCGTCGTGACTCGAGAAGAGGGAAGGTTAGCGGTTGGAAGATTAGGCGCTCTCTGCGAGCAGATTAAACAACTCAACTCTCTCGGATACGACATTATTCTCGTCTCCTCCGGCGCCGTCGGTATCGGCCGCCAACGACTCCGCTACCGCAAACTAATCAACAGCAGCTTCGCAGACCTTCAGAAACCCCAACTCGAACTCGACGGCAAGGCCTGCGCCGCCGTTGGACAGAACAGTCTCATGGCTCTCTACGACACTTTGTTCACTCAGCTTGACGTGACGTCTGCTCAGCTTCTTGTGACGGACAACGATTTTCGAGATAAGGATTTCAGGAAGCAGCTTACCGAAACCGTGAAGTCGTTGTTGGCGCTCAAGGTTATTCCGGTGTTCAATGAGAACGATGCTGTCAGTACTCGGAAGGCTCCATATGAGGATTCTTCTGGGATATTTTGGGATAATGATAGTTTATCTGCTTTATTGGCCTTGGAGTTAAAAGCCGACCTTCTTGTTTTGTTGAGTGATGTAGAAGGTCTTTATAGTGGCCCCCCGAGTGACCCACATTCAAAGCTTATTCATACATATATTAAGGAAAAGCATCAGAATGAAATTACTTTTGGCGACAAGTCTAGAGTGGGAAGAGGTGGAATGACAGCCAAAGTAAAAGCTGCTGTTCATGCAGCTGAAGCCGGCATTCCCGTTGTTATTACCAGTGGTTTTGCAGCTGAAAATATCATTAATGTTCTCCAAGGACAACGTATAGGAACTCTCTTCCATAAAGATGCACATGAGTGGGTCCAAGTAAAAGAGGTTGATGCACGTGAGATGGCAGTTGCAGCCAGGGAATGCTCCAGAAGGCTGCAGGCAATATCTTCAGAAGAAAGGAAACAAATTTTACTAAAAATAGCTGATGCCCTGGAAGCAAATGAAAATGTAATCAGGACTGAAAATGAAGCTGATGTTGCTATGGCACAAGAAGCAGGATATGAAAAATCCTTGGTGGCTAGGCTAGTCTTAAAACCTGGGAAGATTGCAAGCCTTGCAAACAACATGCGAATTATTGCCAACATGGAAGATCCAATTGGTCAAATATTAAAACGAACTGAGCTTTCAGATGGGCTAATTTTAGAAAAGACATCATCTCCTTTGGGAGTGCTCCTTATTGTTTTTGAATCACGCCCTGATGCTCTTGTACAGATTGCTTCTCTGGCAATCCGAAGTGGGAATGGGCTTCTCTTGAAAGGTGGCAAGGAAGCTAAGCGGTCAAATGCAATTTTGCACAAGGTAATTACAGAGGCCATACCAGATACTGTTGGTGGAAAACTTATAGGGCTTGTAACCACAAGGGAAGAAATCCCTGAGCTACTTAAGCTGGATGACGTAATTGATCTGGTGATTCCAAGAGGCAGCAACAAACTTGTTTCTCAGATCAAGAGTTCCACTAAAATTCCTGTTTTAGGTCATGCTGATGGAATTTGCCATGTCTATGTTGATAAGTCTGCTAATGTGGAAATGGCAAGGCGGATTGTACTGGATGCTAAAATAGATTATCCAGCAGCCTGCAATGCCATGGAAACACTTCTTATCCATAGGGATTTGATAGAGAAAGGTTGGCTCAATGATATTGTTGTTGACTTACGAAATGAAGGCGTTATATTGTATGGAGGACCTAGGGCAAGTTCTCTGTTAAATATTCCACGAGCACATTCATTTCATCATGAGTACAGTTCGCTTGCTTGCACTGTTGAAATTGTGGATGATGTGTATGCAGCTATTGATCATATAAATCTTTATGGAAGTGCACATACTGATTCCATTATTGCAGAAGATAAGGAAGTAGCAAATGTGTTTCTACGCCAAGTAGACAGTGCTGCTGTTTTTCACAATGCAAGCACCAGATTCAGTGATGGGGCACGATTTGGACTAGGTGCAGAGGTTGGAATTAGTACGAGCAGGATTCATGCTCGAGGTCCAGTAGGAGTTGAGGGATTGTTAACAACAAGATGGATACTAAAAGGAGGTGGACAAGTAGTAGATGGTGATAGAGGAATTGTCTACACCCACACAGACCTTGCAACTTAA 2148 0.4418 MEVLDPSRSFMRNVKRVIIKVGTAVVTREEGRLAVGRLGALCEQIKQLNSLGYDIILVSSGAVGIGRQRLRYRKLINSSFADLQKPQLELDGKACAAVGQNSLMALYDTLFTQLDVTSAQLLVTDNDFRDKDFRKQLTETVKSLLALKVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLVLLSDVEGLYSGPPSDPHSKLIHTYIKEKHQNEITFGDKSRVGRGGMTAKVKAAVHAAEAGIPVVITSGFAAENIINVLQGQRIGTLFHKDAHEWVQVKEVDAREMAVAARECSRRLQAISSEERKQILLKIADALEANENVIRTENEADVAMAQEAGYEKSLVARLVLKPGKIASLANNMRIIANMEDPIGQILKRTELSDGLILEKTSSPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVITEAIPDTVGGKLIGLVTTREEIPELLKLDDVIDLVIPRGSNKLVSQIKSSTKIPVLGHADGICHVYVDKSANVEMARRIVLDAKIDYPAACNAMETLLIHRDLIEKGWLNDIVVDLRNEGVILYGGPRASSLLNIPRAHSFHHEYSSLACTVEIVDDVYAAIDHINLYGSAHTDSIIAEDKEVANVFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGGGQVVDGDRGIVYTHTDLAT 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01531 715 ProSitePatterns Glutamate 5-kinase signature. 232 249 IPR019797 GO:0004349|GO:0006561
Cca05g01531 715 Pfam Amino acid kinase family 15 260 IPR001048 -
Cca05g01531 715 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE SYNTHASE 3 714 - -
Cca05g01531 715 Gene3D - 5 288 IPR036393 -
Cca05g01531 715 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 3 714 - -
Cca05g01531 715 TIGRFAM P5CS: delta l-pyrroline-5-carboxylate synthetase 8 713 IPR005766 GO:0003824|GO:0006561
Cca05g01531 715 PIRSF P5C_synthetase 1 715 IPR005766 GO:0003824|GO:0006561
Cca05g01531 715 Pfam Aldehyde dehydrogenase family 289 558 IPR015590 GO:0016491
Cca05g01531 715 CDD ALDH_F18-19_ProA-GPR 296 695 IPR000965 GO:0004350|GO:0006561
Cca05g01531 715 SUPERFAMILY Carbamate kinase-like 15 280 IPR036393 -
Cca05g01531 715 SUPERFAMILY ALDH-like 294 699 IPR016161 GO:0016491
Cca05g01531 715 Hamap Gamma-glutamyl phosphate reductase [proA]. 294 700 IPR000965 GO:0004350|GO:0006561
Cca05g01531 715 PRINTS Glutamate 5-kinase family signature 52 66 IPR001057 GO:0005524|GO:0016301
Cca05g01531 715 PRINTS Glutamate 5-kinase family signature 96 124 IPR001057 GO:0005524|GO:0016301
Cca05g01531 715 PRINTS Glutamate 5-kinase family signature 136 157 IPR001057 GO:0005524|GO:0016301
Cca05g01531 715 PRINTS Glutamate 5-kinase family signature 175 202 IPR001057 GO:0005524|GO:0016301
Cca05g01531 715 PRINTS Glutamate 5-kinase family signature 234 254 IPR001057 GO:0005524|GO:0016301
Cca05g01531 715 Hamap Glutamate 5-kinase [proB]. 15 284 IPR005715 GO:0005737|GO:0006561
Cca05g01531 715 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 512 658 IPR016163 GO:0016620
Cca05g01531 715 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 303 698 IPR016162 GO:0016491
Cca05g01531 715 TIGRFAM proB: glutamate 5-kinase 15 286 IPR005715 GO:0005737|GO:0006561
Cca05g01531 715 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 302 689 IPR000965 GO:0004350|GO:0006561
Cca05g01531 715 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 607 629 IPR020593 GO:0004350|GO:0006561
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01531 Cca-Chr5 34456648 34464566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01531 K12657 - gmx:100809989 1298.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01531 05 34456648 34464566 Cca05g01531 05 34456648 34464566 ECH
Cca01g00363 01 4164924 4165593 Cca05g01531 05 34456648 34464566 PCT