Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00363 ATGGAGCACACAGATCCCTGTAGACATTTCATCAAAGACGTTAAGCGCATCATCATTAAGGTTGGAACTGCTGTGGTCACTCGCCAAGATGGAAGGTTAGCGGTTGGAAAATTAGGGGCACTCTGTGAGCAGATTAAGGAGCTGAACTCTCTGGGTTATGAGATTATTTTGGTGTCATCAGGTGCTGTTGGCCTTGGTCGCCAAAGACTTAGATACAGAAAATTAATTAACAGCAGTTTTGCTGACCTTCAGAAGCCACAAGTTGAACTTGATGGCAAGGCTTGTGCTGCTGTTGGACAAAACAGCCTTATGGCTCTTTATGATACATTGTTTAGTCAGGTAATTGTTTTGAGTTGA 357 0.4314 MEHTDPCRHFIKDVKRIIIKVGTAVVTRQDGRLAVGKLGALCEQIKELNSLGYEIILVSSGAVGLGRQRLRYRKLINSSFADLQKPQVELDGKACAAVGQNSLMALYDTLFSQVIVLS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00363 118 Gene3D - 11 117 IPR036393 -
Cca01g00363 118 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1 117 - -
Cca01g00363 118 PRINTS Glutamate 5-kinase family signature 96 118 IPR001057 GO:0005524|GO:0016301
Cca01g00363 118 PRINTS Glutamate 5-kinase family signature 52 66 IPR001057 GO:0005524|GO:0016301
Cca01g00363 118 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 1 117 - -
Cca01g00363 118 Pfam Amino acid kinase family 15 113 IPR001048 -
Cca01g00363 118 SUPERFAMILY Carbamate kinase-like 15 113 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00363 Cca-Chr1 4164924 4165593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00363 K12657 - gmx:548058 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00363 01 4164924 4165593 Cca05g01531 05 34456648 34464566 PCT