Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01471 ATGATTTTGTCAACCTCTTATGATATAAATACCCCCACAATATTAGTTGAGGCAAAAAGACGTACCTTAATTTGGCGAAAGAGTAAAGCAACAGAAGAGATGGGGAACAGCGTGGGAAGGAGTAAAAAAGCGAAGGTGATGAAGGTGGATGGGGAAACGTTCAAGCTCAAGACTCCAGCCAGAGCAAACGACGTCGTCAAGGACTACCCTGGTCACGTTCTCATGGACTCCGAAGCTGTCAAACATTTCGGGCTTCGGGCCAGGCCCTTGGAGCCCCACCAGGAGCTTCGGCCCAAGAAAATCTACTTCCTCGTGGAGCTGCCCAAGATTCAGCCCCAAGAGGAAAAAACGGCGCTGCCTAGGAGGGTGCGATCCAGTGGAATACGCGGCATGAACGCTAAGGATAGACTCGACCTCTTGATGCTCTCCAAACGCTCCGTTTCGGACCTCGTCAGGCCCGCTCCCAATCTGGGTCCGGACGGGCCCGGGCCCATGAGGGTTAAGATGAGGCTCCCCAAGGCCCAATTGGAAAAGCTGATGGAGGAGAGCACCGACGGGTCCCAGGTGGCGGAGAAAATCATAAGTTTGTACATGGGAGCCAATGCCGCCGAGGCTGACGCCGCCGCTGCGCCGGTGCACCATCACATTCACAAACCACGTGGGAAACGAGTGAGTTTTAGCCCAATGGAAAATGAAGAAATTCATGTAGAAGCAGGTCCACAATAG 726 0.5331 MILSTSYDINTPTILVEAKRRTLIWRKSKATEEMGNSVGRSKKAKVMKVDGETFKLKTPARANDVVKDYPGHVLMDSEAVKHFGLRARPLEPHQELRPKKIYFLVELPKIQPQEEKTALPRRVRSSGIRGMNAKDRLDLLMLSKRSVSDLVRPAPNLGPDGPGPMRVKMRLPKAQLEKLMEESTDGSQVAEKIISLYMGANAAEADAAAAPVHHHIHKPRGKRVSFSPMENEEIHVEAGPQ 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01471 241 Pfam PADRE domain 34 182 IPR025322 -
Cca05g01471 241 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN 34 239 - -
Cca05g01471 241 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 34 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01471 Cca-Chr5 33477832 33480184 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01471 - - ccaj:109790903 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00417 01 4986472 4990174 Cca05g01471 05 33477832 33480184 PCT