Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00417 ATGGGAAACGCTATGGGGAGTAAAAAAGCAAAGGTGATGAAGATAGACGGTGAAACGTTCAAGCTGAAGACTCCCGCTAGAGCGAACGACGTCGTTAAGGACTACCCGGGCCACGTTCTGCTGGACTCTCACGCGGTGAAACATTTCGGGCCTCGGGCCAAGCCGCTGGAGCCGCACCACGAGCTGAGGCCCAAGAAGATTTACTTTTTGGTGGAGCTGCCCAAGGTTCAGCCCGAACCGCTAGCGAGGAGGGTGCGGTCCAGTGGAATCCGCGGCATGAACGCCAAGGATAGGCTCGATTTCTTGATGCTATCCAAACGCTCCGTTTCGGACCTCACCATGGTCAAACACGGGCCGGGCCCGGACGACAACGGCGCTGGCCCCACCAGAGTCAGAATGAGGCTGCCCAAGGCCCAGCTCGAGAGGCTCATGGAGGAGAGCCACGACGGGAGCGAGGTGGCGGAGAAGATCATAAGTTTGTACATGGGGAACAATGCCACCGCCGTGGACGGCGGCGCCACGGCGGATGCCGGAAAGGAGGTTCAAAATCACAAACCGCGAAGGAAACGGGTGAGTTTCAGCCCCATGGAACAAGGAGAAATTCATGAAGAAACAGAACTTGTCTATAGCAGTCCTTCTAGATAG 645 0.569 MGNAMGSKKAKVMKIDGETFKLKTPARANDVVKDYPGHVLLDSHAVKHFGPRAKPLEPHHELRPKKIYFLVELPKVQPEPLARRVRSSGIRGMNAKDRLDFLMLSKRSVSDLTMVKHGPGPDDNGAGPTRVRMRLPKAQLERLMEESHDGSEVAEKIISLYMGNNATAVDGGATADAGKEVQNHKPRRKRVSFSPMEQGEIHEETELVYSSPSR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00417 214 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 204 - -
Cca01g00417 214 MobiDBLite consensus disorder prediction 190 204 - -
Cca01g00417 214 Pfam PADRE domain 1 183 IPR025322 -
Cca01g00417 214 MobiDBLite consensus disorder prediction 175 214 - -
Cca01g00417 214 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00417 Cca-Chr1 4986472 4990174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00417 - - gmx:100819441 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00417 01 4986472 4990174 Cca05g01471 05 33477832 33480184 PCT