Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01382 ATGGGTACATGTTTTAGCAAGAAGAATGTGTCCTCTACCTCACCCAACAAGTCAGTTTCTCAGCATAGAAACTCTCAGAACAGTGTCACTGTCAGCTTGTCCAAACCCTCTGAGCCAGAAGTGAGCCTCAAGAACAAGACAGTGCAAGAGAAACAGCCAGCACCACAAAATGAAGGTGATGAAGTGAACAAAGAGGTATTCATCATCAAACACAGAAAGAGCCATGATGACAGGGAAAGAACCAAAACCCCACCTTGCATTGATGGGGTTGTCACCAATGAAGAGCCAATAGGTAACAACAAGATTGCACCTTCCACACCATTGAATGTTGGGGTGAGGACTTCAAGCTGCACCAAAGAAGAGGTTGATGCAATTCTAATCCAGTGTGGGAGGCTCAGCAGAAGCTCTTCCACCAGAAAGTACTCAGGCTCAAAGAGAAGTTTTGATTTTGACAATGACAATGACACAACTTCTGCTGAGGATGGCCAGAGAAAAGGCAATGGCAGTGATGAAAATGATAGCCGCCGCCACCGCCAGTCGCCACGGCGTTCTCAGGGAAGGAGGAGAACTCCAAGTAGGGAGAGAGAACAATCCAGCAGCAGAGAAAGGAGAGTGAGTAGATCTCCTGGTAGAAGATCTTCTGACACCACTGCAAATGcaagcaacaacaacaacaacacaaGTTCTAGGCCTGGGAAAATGGTGTCTGTTCCTGCCACTGTTTCATCTTTGGCTATGGACAAGAGTAACAACTGTGGTGGTGGAGAATCTGGCACCAAGAGGAAAACTGTTAAGAGGAACGTTGGTGATGTTGGTTCAAGGGGTGCAGCATCACCACGTGCTCAGTCTCCTGCTAGAGTTAATGGTAATGTGGCAAGTGCTAAAGTATTGAGTGAGAATCAGCACCACCAACAACAACCCTCTCTCAGCCGTAATAACTCTTCAAGGAAAGCAGAACTATCTCCTTACAGAAGAAACCCTCTGAGTGAGGTTGATACTAACATCAAGGTGCAACAAAACAAGCCCAGGATTGAAGCTGAAGCCATTCAGAAACCAAATGGCAAAGTTGCATTGGAGAAGGGTGTGAGTGTGAATTGCAAAACAAAGGAGCAACATGGGGAAGAGTCTTCAGTGCCTGATAGTGCTGCTATGAAGAAAATGGTATCATCATCAGGGGTTGACAACCTTAAACCACAAGGTTTAACAAGAAGCAGATCTTCTAGAAGATCTAGAGACTTAGACATCAATCCTGAACCTGTGGTGAACTCATCAAACTCCTATGCTTCCCTACTCCTTGAGGACATCCAGAACTTCcatcaaaagaacacaccaccacaaccacaaccacaacaacaaccTTCTATTTCTCTCCCTGCATGTCTCAACAAGGCTTGCTCTATCCTTGAAGCTGTTGCTGATCTCAACTCCACCACCAGCTCAAATTTCTCTGAGGACAGGAAGAGTCCATCCACTCAACAATCTATTAGGAATGAGTACAATCACTATGGGAAGAAGAAAGTGGCACTTGCCAAGGACCCTTTCATAGAATCTGAGGTGGCTGTTAGTGATGATGTGATGGAACCAAGCTTGCACAAGTATGTGACAGTGAAGAGGGGTGGTGGAATAGACATGGAGGACCAAGAGTCTTCAGGAAGCAACAGCTTCACTGTGAGTAGTCATAGTGGCCAACATCATTGGGGCATTTCTTGTTCCTCATCATGGGAACCAAATTCTGCTGACTCAACAGATTGCTGGACTTCAAGATTGAGCACCTTGGAAAGTGATTTGTCATGTGAAGCCAAGAAGTGTATGAGCAACAAAAGTAGAGAGTGTGATCATGAACACAGCAGTGGAATTGGACGTGGCAGGCTTGGTTCCAATAAGGGTCTTAACATGTTACCTGCTGCTACAACCTAG 1917 0.4408 MGTCFSKKNVSSTSPNKSVSQHRNSQNSVTVSLSKPSEPEVSLKNKTVQEKQPAPQNEGDEVNKEVFIIKHRKSHDDRERTKTPPCIDGVVTNEEPIGNNKIAPSTPLNVGVRTSSCTKEEVDAILIQCGRLSRSSSTRKYSGSKRSFDFDNDNDTTSAEDGQRKGNGSDENDSRRHRQSPRRSQGRRRTPSREREQSSSRERRVSRSPGRRSSDTTANASNNNNNTSSRPGKMVSVPATVSSLAMDKSNNCGGGESGTKRKTVKRNVGDVGSRGAASPRAQSPARVNGNVASAKVLSENQHHQQQPSLSRNNSSRKAELSPYRRNPLSEVDTNIKVQQNKPRIEAEAIQKPNGKVALEKGVSVNCKTKEQHGEESSVPDSAAMKKMVSSSGVDNLKPQGLTRSRSSRRSRDLDINPEPVVNSSNSYASLLLEDIQNFHQKNTPPQPQPQQQPSISLPACLNKACSILEAVADLNSTTSSNFSEDRKSPSTQQSIRNEYNHYGKKKVALAKDPFIESEVAVSDDVMEPSLHKYVTVKRGGGIDMEDQESSGSNSFTVSSHSGQHHWGISCSSSWEPNSADSTDCWTSRLSTLESDLSCEAKKCMSNKSRECDHEHSSGIGRGRLGSNKGLNMLPAATT 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01382 638 MobiDBLite consensus disorder prediction 1 56 - -
Cca05g01382 638 PANTHER OS02G0734667 PROTEIN 1 637 IPR040412 -
Cca05g01382 638 MobiDBLite consensus disorder prediction 368 421 - -
Cca05g01382 638 MobiDBLite consensus disorder prediction 1 334 - -
Cca05g01382 638 MobiDBLite consensus disorder prediction 607 638 - -
Cca05g01382 638 MobiDBLite consensus disorder prediction 283 320 - -
Cca05g01382 638 MobiDBLite consensus disorder prediction 187 210 - -
Cca05g01382 638 MobiDBLite consensus disorder prediction 63 84 - -
Cca05g01382 638 MobiDBLite consensus disorder prediction 144 179 - -
Cca05g01382 638 MobiDBLite consensus disorder prediction 211 257 - -
Cca05g01382 638 MobiDBLite consensus disorder prediction 98 116 - -
Cca05g01382 638 PANTHER OS02G0734667 PROTEIN 1 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01382 Cca-Chr5 32089919 32092737 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01382 - - gmx:100805280 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01382 05 32089919 32092737 Cca05g01382 05 32089919 32092737 ECH
Cca01g00516 01 6391910 6394561 Cca05g01382 05 32089919 32092737 PCT