Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01136 ATGCACAAGATTCTCTGGGGAAGGAAGGAACCTCTGTGGCCTGAGTTGGATCAGTTGCTTCGAGATGAGGATGACGTAAATATTGTCTCTACTCCTTATAAGGCCGCTATTCCTGAATATAGAGTGGTTATTCATGATTCCATTGTCACATCTTGCAATGATAATCACTTAAATGTGGCATTTGGGAATGCTGTGGTTAATGTTGCTGTTCAAAGAGAACTTCACAAACCTAAGTCTGACCGCTCTTGCATACATGTGGAGTTTGACATATCAGGGACTGGCATAGTATATGAAACTGGTGATCATGTGGGAGGTTCTCTGCCACCTCCTTTCATTGGCCTTTGCACACTGCGCTTTGCTTTAGCACGTTATGTAGATCTCTCGAACTCCCCACACAAGGCTGCTTTGGTTGCTCTGGCTGCACATACTTCGGAACCTAGTGAAGCAGATAGATTAAAGGTCCTCTCATCTCCTCAAGGGAAGGACGAATGCTCCAAATGGGTGGTTGGAAGTCAGAGAAGTCTCCTTGAGGTAATGGCTGAGTTCCCATCAGCAAAACCACCCTTAGGTGTTTTTTTGGCTGCAGTAGCTCCTCACATACAACCTCGTTATTATTCTATTTCATCCTCACCTAGATTTGCCCCAAAAAGGGTACATGTAACTTGTGCCTTGGTGTGA 678 0.4484 MHKILWGRKEPLWPELDQLLRDEDDVNIVSTPYKAAIPEYRVVIHDSIVTSCNDNHLNVAFGNAVVNVAVQRELHKPKSDRSCIHVEFDISGTGIVYETGDHVGGSLPPPFIGLCTLRFALARYVDLSNSPHKAALVALAAHTSEPSEADRLKVLSSPQGKDECSKWVVGSQRSLLEVMAEFPSAKPPLGVFLAAVAPHIQPRYYSISSSPRFAPKRVHVTCALV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01136 225 Gene3D Translation factors 202 225 - -
Cca05g01136 225 Gene3D Translation factors 66 104 - -
Cca05g01136 225 Gene3D - 108 201 IPR023173 GO:0016491
Cca05g01136 225 PANTHER NADPH--CYTOCHROME P450 REDUCTASE 107 225 - -
Cca05g01136 225 Pfam FAD binding domain 65 104 IPR003097 GO:0016491
Cca05g01136 225 Pfam FAD binding domain 109 225 IPR003097 GO:0016491
Cca05g01136 225 PANTHER NADPH--CYTOCHROME P450 REDUCTASE 9 104 - -
Cca05g01136 225 PANTHER NITRIC OXIDE SYNTHASE-RELATED 9 104 - -
Cca05g01136 225 PANTHER NITRIC OXIDE SYNTHASE-RELATED 107 225 - -
Cca05g01136 225 SUPERFAMILY Riboflavin synthase domain-like 65 225 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01136 Cca-Chr5 28623469 28625522 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01136 K00327 - gmx:547712 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01136 05 28623469 28625522 Cca05g01136 05 28623469 28625522 ECH
Cca05g01136 05 28623469 28625522 Cca03g01297 03 30654275 30661774 PCT