Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01134 ATGTTGCAAAGGGCAGCAAGCAATGCATATACATGGTGGTGGGCCAGCCACATCAGGACAAAGCAGTCAAAATGGCTGGATCAAAGCCTCCAAGATATGGAGGAGAAGGTTACTGAAACCCTCTCCATCCTGTGTGATGAGGGGGACTCATTTGCAAAGAGGGCTGAAATGTATTACAAGAAGAGGCCAGAGCTGGTAAATTTTGCGCAAGAAGCCTTTAGAGCATATAAAGCCTTAGCAGAGAGATATGATCATTTATCAAAGGAACTCCAAAGTGCAAACCGCACAATAGCCAGCGTCTTCCCAGACCAAGTTCCATGTCAAATTGAAGAAGATGATGAAGAAGAAAGTGACACAGGAACTAATTCATCAACACCAGTCCCCGACaacaaacaaacacaaaataaaccaacaaTTCCTAAAGTTCCCAAGACACCAAAGAAGGAGTTTAGAAGTCCATCCATGTTTCTCTCCAGAAAGGGCAATCTTAGGAGGTCTAGTAGCTCTGCAAAATATGTTCCAAACGTTATGACTTCAGGTCTTTCCAAGGTTGAAGCCTTAACAGAAATTGACAAGCTTCAGAAAGAAATATTGGCATTACAAACTGAGAAAGAGTTTGTGAGGAGTTTGTATGAACGCGCCTATGAAAAGTACTGGGAGATTGAAGACCAGATCACATCAATGCAGAAAAGAGTTTGCAGTTTGCAAGATGAGTTTGGTGTTGGTACAATGATAGAAGACAATGATGCTAGAGCTTTGATGGCAGCCACAGCTCTAAAATCATGCCAAGAGACCCTGAAAAAGTTGCAAGAGATACAAGAAAAATCATCTAAAGAAGCTAAAGAGGAGTATGAAAAGGTTAAGAAAGCTCACGAGATGTTTGAGACCCTTAGAGACCAATTCATTTCTAAATATATGAGTAAACAAGACCAAGTTCCTGAGAGTGCAGGAACGGATAAAAAATGCATAGATGAAGAGATGGATCACTTGGAGCAAGAGGAGCATGATGTGGGGCTGTTGAGAGAGAAGATTAAACAAAAGTTGGAGGAAAATTCAGGTAATACCCTCACTGTGACTGAAATGGCTGAGTGCATTGATGAGCTTGTAAATAAGGTTGTTACCTTGGAAACTGCGGTTTCATCTCAGACTGGTTTGGTAAAGACACTAAAATCAGAAACAGATGAACTTCACACAAACATAAGGAAGTTGAATGAAGACAAGGAAATGCTCATAGAAGGCTCAGAAGCTACCAACCAGAGGCTAAAGAAATTGGAGGATGAGTTGCAGAGAGTTAAAATGCTCAACCGAAGTGTCAGATCTCAAGACAACACCCTCCAAACACACTTCACTGAAGCAAGCTGTAACATTGAGCACCTTTCTAAAAAATTGAATTACATGAAACAAGATGAGGAGGGGGAGGAGAACTTGGTACTTTACAAGAAGAAAAGTGCTGCTGATGATAAACCAGGGACTGAAAAACTTGGTGCTAACTTGTCGACAATAAAGGATGAGGATGATAACAGGTCCAATTTGAGTGATAGAACTTTAAGTGTTCAGAAGCTGGTACAACCAGATAAGGATGATTTATCTGATACAGTGAGCAACCTTGACACTGAATCACATGATTTGGAAGCTAGTGAGGAAGATCAACCTAATTGGAGGCAGATGTTTATAAGTGGATTAGATGACAGAGAAAAGATTCTGCTGGAGGAGTACACTTCGGTCTTAGTGAATTATAAGGATGTAAGGGTGAAGCTCAATGATGTGGAAAAGAAAAATAGGGAAAGCATTTTTGAGTTGACACTTCAGCTAAGGGAAATGAGGAATGCTCTTGTGACAAAGGATAAAGAGATACAGATTTTACATCAGAAGATGAACTGTCCAGATGGAAATCCGGATGAAAGTCCCTACACCACCACCACAGAATACAAATACACGCCACATGAAGGGCTTCTTCAAAAAGCAGGTCAAGAAGCGGAGTCAAAAATTTCATCTTCAAATTTAGATGCAAAATCCCATTTTGCAGAACAAGTTGAATCTGAGAGAACAGGAAATAATGCCTTATCATCTATGAGAATGACACTAGAGAAGCTGATGGCACATCAAGATAAGTGCCATGATCTTTCAGATTTGGAAAAGAAATTCCGTTCGGACATTGACGATTTGCTAGAAGAGAACCTGGAGTTTTGGCTGAGGTTTAGCACTTCAGTTCATCAGATTCAAAAGTTCCAAAACTCTATTCAGGACTTAAAAGCTGAGCTAAAATTGATAAGGGAAAAAAACAAGAAGTCTGAAGGGTATTCATATTCTAAACCACAGCCTATACAATCTCAACTCAAGCCAATATTCAGACACCTAAGAGAGATAAGAACTGAGTTATCACTGTGGGTGGAACACAATGCAGTGTTGCAGGATGAACTGCAAGGAAGGTACTCATCTTTGTCCAACATCCAAGATGAGATTGCAAGAGCAGCAAACATGGAATCCGGTGCTGAAGAGGCCGAGCTAATGAGTAAGTACCAAGCTGCAAAGTTTCAGGGTGAGATTCTCAACATGAAGCAAGAGAACAGCAAGGTTGCAAGCGAACTGCAAGCAGGTCTTAGCCTTGTGAAGGGAATGAAGGATGACGTCGAGAAGACACTAGATGAGCTAGATGGAGTCATTGGTACTGATAGTAATGTTAATAAGAGTAATGCTCATATGAAACACTCCAGTAGTCGTGCTCGAATACCCTTGAGATCTTTCTTATTTGGAGTCAAGTTAAAGAAGCAAAAGCATCACCCATCTCTATTTGCATGTGTCAATCCAACATTTAACAGACAATACAGTATCACTGAAGCACCCGAACCACAATAA 2856 0.4034 MLQRAASNAYTWWWASHIRTKQSKWLDQSLQDMEEKVTETLSILCDEGDSFAKRAEMYYKKRPELVNFAQEAFRAYKALAERYDHLSKELQSANRTIASVFPDQVPCQIEEDDEEESDTGTNSSTPVPDNKQTQNKPTIPKVPKTPKKEFRSPSMFLSRKGNLRRSSSSAKYVPNVMTSGLSKVEALTEIDKLQKEILALQTEKEFVRSLYERAYEKYWEIEDQITSMQKRVCSLQDEFGVGTMIEDNDARALMAATALKSCQETLKKLQEIQEKSSKEAKEEYEKVKKAHEMFETLRDQFISKYMSKQDQVPESAGTDKKCIDEEMDHLEQEEHDVGLLREKIKQKLEENSGNTLTVTEMAECIDELVNKVVTLETAVSSQTGLVKTLKSETDELHTNIRKLNEDKEMLIEGSEATNQRLKKLEDELQRVKMLNRSVRSQDNTLQTHFTEASCNIEHLSKKLNYMKQDEEGEENLVLYKKKSAADDKPGTEKLGANLSTIKDEDDNRSNLSDRTLSVQKLVQPDKDDLSDTVSNLDTESHDLEASEEDQPNWRQMFISGLDDREKILLEEYTSVLVNYKDVRVKLNDVEKKNRESIFELTLQLREMRNALVTKDKEIQILHQKMNCPDGNPDESPYTTTTEYKYTPHEGLLQKAGQEAESKISSSNLDAKSHFAEQVESERTGNNALSSMRMTLEKLMAHQDKCHDLSDLEKKFRSDIDDLLEENLEFWLRFSTSVHQIQKFQNSIQDLKAELKLIREKNKKSEGYSYSKPQPIQSQLKPIFRHLREIRTELSLWVEHNAVLQDELQGRYSSLSNIQDEIARAANMESGAEEAELMSKYQAAKFQGEILNMKQENSKVASELQAGLSLVKGMKDDVEKTLDELDGVIGTDSNVNKSNAHMKHSSSRARIPLRSFLFGVKLKKQKHHPSLFACVNPTFNRQYSITEAPEPQ 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01134 951 MobiDBLite consensus disorder prediction 110 169 - -
Cca05g01134 951 Coils Coil 740 760 - -
Cca05g01134 951 Coils Coil 330 350 - -
Cca05g01134 951 Coils Coil 183 210 - -
Cca05g01134 951 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Cca05g01134 951 Coils Coil 386 441 - -
Cca05g01134 951 Pfam KIP1-like protein 12 84 IPR011684 GO:0003779
Cca05g01134 951 PANTHER PROTEIN NETWORKED 2A 1 943 - -
Cca05g01134 951 Coils Coil 259 290 - -
Cca05g01134 951 MobiDBLite consensus disorder prediction 120 140 - -
Cca05g01134 951 PANTHER PROTEIN NETWORKED 2D 1 943 - -
Cca05g01134 951 MobiDBLite consensus disorder prediction 520 549 - -
Cca05g01134 951 Coils Coil 69 96 - -
Cca05g01134 951 MobiDBLite consensus disorder prediction 485 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01134 Cca-Chr5 28608286 28612292 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01134 - - ccaj:109815004 1825.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01134 05 28608286 28612292 Cca05g01134 05 28608286 28612292 ECH
Cca05g01134 05 28608286 28612292 Cca03g01301 03 30702966 30707706 PCT