Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01301 ATGTTGCGAAGGGCAGCGACCAATGCATATTCATGGTGGTGGGCAAGCCACATCAGGACTAAGCAATCCAAATGGCTAGAACAAAGTCTCCAAGATATGGAGGAGGTGGTGGCTGAAACCCTAAAAATTATTCATGATGAAGGGGAATCATTTTCCCAAAGGGCAGAAATGTACTACAGGAAGAGGCCACAACTGGTAGGTTACGTGGAAGAAGTGTTTCGAGCATATAGAGCATTAGCTGAGAGATACGATCTTCTGTCAAAGGAGCTCCAAAGTGCCAACCGCACTATTGCCAGTGCTTTCCCAGAACAAGTCCATTATAGAATTGATGAGGATGATGGTGAAGAAGGCTTCCATGGAACAAATTCATCATCTCAACACCCCAACAACCAAACACCAAAATCAAGCATTCCTAAAGCCCCAAATATGCCAAAGAAGGATTTTAGAAGCCCATCAATGGTGCTCTCTAAGAAGGGTACATTTAAGAGATTTGCAAAATCTGCTCCCACAAGTCCTCATTCAGGTCTGAGTAAGGTTGCAGCACTAGCAGAAGTTGACAAGCTTCAGAAAGAAATGTTGGCACTACAAACTGAGAAAGAGTTCGTAAAGTGTTTGTATGAACATTCCTATGAAAAGCACTGGGAAATTGAGGACCGTATTACTGAAATGCAAAAAAGAGTTTACAGTTTGCAAGATGAGTTTGACATTAATGCAATCATAGAGGACAATGAGGCAAGAGCTTTAATGGCATCAACAGCTCTAAATTCATGCAAAGAGAGCCTTGCTAAATTGCAAGGTGTACAAGTACAATCATCTGAAGAGGCTAAAGTAGCACACCAAAGGGTTAAGGAAGCTCATGCCAAGTACGAAGCCCTTAAAGACCAATTCATTTCTAAACATAAAAGTCAACAAGACCACGGAATAGAACCGAAAAACATAGAGGAAGAAGACTTGTCTAACTTGGAAGAAGAAATGCATGAGCATGATGTGGGGAAGTTAAGAGACATGATTAAGAAAAAGCTTGAGGAAGATTCAGGTAGCTCCCTCACTATGACAGAAATCGTAGAGAAGATTGATGAGCTTGTAAGTAAGGTTGTTACCCTAGAAACTGAGGTCTCTTCTCAGACTGGCTTGGTAAAGAGACTGAGATTAGAAGCAGATGAACTTCAAAAAAATATACTGAGCTTGGAAGAGGGCAAGGAAATGCTGATTGAAGATTCAGAAGAAACAAAAAAGAAGCTGAAAGAAGTGGAGGAGGAGCTGAGGAGAGTTAAAATTCTCAATGAAAATATCAAAAGGAAAGGCAATAACCACCAAACACACTTTACTGAGGCTAGTTGTGATCTTGAACACCTTTTAGGAAAAATGAATGATGTAAAGCTAGAGGAGGAGGGGGAAAACTCGCTACTATATAAAAACCAAAGTGCACCAGATGAAGAACTAGAAGAGTCTGAAAAACCAGGTGATAACACAAAAATCATGAAGGATGTTAATATAACCAAGGAGAATAAGGAAGATCGTAGCGTATATATTGGTGATGTTAGAAATGAAGATAACAGGTCCAATTTGAAGGAAAATATTGATTTTAGGAATGAAGAGGAGTTTGAAAAACCAGGTGATAACACAGAAATCATGAAGGATGTTAAGATAACAAAGGAGGGAAAGAAAGATCATAGTGTAAATATTGGTGATGATAGTAATGAAGATAACAAGCCCAATTTGAAGGAAACTATTGATTTTAGGACTGAAGAGATTCCAGAGCCAATGGTGCAGGAGAAGGATGATTTGTCTGAGGTAAGGAGTAATGTTGAGACCGAATCACTTGATCTGGGGACTGGTGAGAAAGAAGATCAACCTACCTGGAATGACATGTCTACAAGTGGATTAGATGAAACAGAAAAGATTCTATTGGAATACACATCAGTTTTAAGGAGCTACGAGGATGTAAAGGGAAAGCTCAATGATGTGGAGAAGAAAAATCGGGACAACATTTCTGAGTTGACACATCAGGTAAGGGAATTGAAGGATACCGTTGAAATTAAGGATAAAGAGATAAACATTTTACAACAGAAGTTGTCCTGTTCAGAAACAAATCCCGATGAAAGTCATTACACCACTCTCACAGATTATAACCACACGCCACAAGAAGCACTTCTTCAAGGAATAGACTCACAGGATCCTGAAAATCCATCTTCAAACACAGATGCAAGTGCAGTTAGTACTTCTTATGCAAATCAACAACATGTTGAAAACAAAGAAAAGGTTGGCATTAGCATGTCACATGGAAAGACCATACTAGTGAAGGTGAAAACAAACCAGCTTGGAAAAAGCCACTCACTTTCAAACTTAGAAAAGAAATTTCGTTCAGACATCGATGATTTGCTAGAGGAGAACTTGGAGTTCTGGCTGAGGTTTAGCACCTCGGTGCATCAGATTCAAAAGTTTCAAAATTCCATTAAGGACTTAAGATTTGAGCTTAGAAAAATAAGGGGTAACAACATGCCCCAAGAGAACTCAAGTTCTATACAATCTGAAATAAAACCAATATTTAGACACCTAAGAGAGATAAGAACGGAGTTATTACTATGGCTTGAACACAATGAAGTGTTGCAGGAAGAGTTGCAGGGTAGGCATCCATCATTGTGCACATTACAAGATGAAATAGCAAGAGCAGCAAATCCAAATTGTGCATCACATATGGCAGAACTAAGTGGATATCAGGCTGCAAAGTTTCAAGGTGAGGTTTTAAACATGAAGCAGGAGAGCAACAAGGTTTCTAGTGAACTCGAAGCAGGTGTGAGTTGTGTGAAGGGACTTAGAGGTCAAGTTGAGAAGATGCTAGAAGAACTGAATCAAGAAATTAGGGCTAACACTCATGGCAACATGAAACACTCCACAAGTCGTGGTAGAATACCCTTGAAGTCTTTTCTGTTTGGAATCAAGTTAAAGAAGCAAAAGCAAACGGTTTTGACATGTGTGCATCCAACACTGCTTAGGCAATATAGTGATCTATCAGAGGCTGAGGATACCTTTATATAG 3039 0.3945 MLRRAATNAYSWWWASHIRTKQSKWLEQSLQDMEEVVAETLKIIHDEGESFSQRAEMYYRKRPQLVGYVEEVFRAYRALAERYDLLSKELQSANRTIASAFPEQVHYRIDEDDGEEGFHGTNSSSQHPNNQTPKSSIPKAPNMPKKDFRSPSMVLSKKGTFKRFAKSAPTSPHSGLSKVAALAEVDKLQKEMLALQTEKEFVKCLYEHSYEKHWEIEDRITEMQKRVYSLQDEFDINAIIEDNEARALMASTALNSCKESLAKLQGVQVQSSEEAKVAHQRVKEAHAKYEALKDQFISKHKSQQDHGIEPKNIEEEDLSNLEEEMHEHDVGKLRDMIKKKLEEDSGSSLTMTEIVEKIDELVSKVVTLETEVSSQTGLVKRLRLEADELQKNILSLEEGKEMLIEDSEETKKKLKEVEEELRRVKILNENIKRKGNNHQTHFTEASCDLEHLLGKMNDVKLEEEGENSLLYKNQSAPDEELEESEKPGDNTKIMKDVNITKENKEDRSVYIGDVRNEDNRSNLKENIDFRNEEEFEKPGDNTEIMKDVKITKEGKKDHSVNIGDDSNEDNKPNLKETIDFRTEEIPEPMVQEKDDLSEVRSNVETESLDLGTGEKEDQPTWNDMSTSGLDETEKILLEYTSVLRSYEDVKGKLNDVEKKNRDNISELTHQVRELKDTVEIKDKEINILQQKLSCSETNPDESHYTTLTDYNHTPQEALLQGIDSQDPENPSSNTDASAVSTSYANQQHVENKEKVGISMSHGKTILVKVKTNQLGKSHSLSNLEKKFRSDIDDLLEENLEFWLRFSTSVHQIQKFQNSIKDLRFELRKIRGNNMPQENSSSIQSEIKPIFRHLREIRTELLLWLEHNEVLQEELQGRHPSLCTLQDEIARAANPNCASHMAELSGYQAAKFQGEVLNMKQESNKVSSELEAGVSCVKGLRGQVEKMLEELNQEIRANTHGNMKHSTSRGRIPLKSFLFGIKLKKQKQTVLTCVHPTLLRQYSDLSEAEDTFI 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01301 1012 MobiDBLite consensus disorder prediction 592 626 - -
Cca03g01301 1012 Coils Coil 664 691 - -
Cca03g01301 1012 Coils Coil 178 205 - -
Cca03g01301 1012 Coils Coil 76 96 - -
Cca03g01301 1012 Coils Coil 812 832 - -
Cca03g01301 1012 Coils Coil 275 295 - -
Cca03g01301 1012 MobiDBLite consensus disorder prediction 476 499 - -
Cca03g01301 1012 MobiDBLite consensus disorder prediction 112 151 - -
Cca03g01301 1012 PANTHER PROTEIN NETWORKED 2D 1 1004 - -
Cca03g01301 1012 MobiDBLite consensus disorder prediction 119 138 - -
Cca03g01301 1012 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Cca03g01301 1012 Coils Coil 936 956 - -
Cca03g01301 1012 MobiDBLite consensus disorder prediction 554 573 - -
Cca03g01301 1012 MobiDBLite consensus disorder prediction 468 499 - -
Cca03g01301 1012 PANTHER PROTEIN NETWORKED 2A 1 1004 - -
Cca03g01301 1012 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Cca03g01301 1012 MobiDBLite consensus disorder prediction 722 743 - -
Cca03g01301 1012 Coils Coil 351 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01301 Cca-Chr3 30702966 30707706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01301 - - ccaj:109795802 1972.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01134 05 28608286 28612292 Cca03g01301 03 30702966 30707706 PCT