Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01094 ATGAAGAAAGTTCTTCTATTAGTAAACTCCATCCTTCTAGCCATAGGCACCTCCGGTGGCCCTCTCGTAATGCGTCTGTACTTCATCCACGGCGGCAACCGTATCTGGCTCTCCAGCTTCCTCGAAACCGCAGCCTTTCCCATCATTCTCATTCCCTTGGCCATCACTCACATCAATCACCATAACCATCATCACCAAACAAAACCTAACCTAATTTCCATGAAACCACCTCTCTTTCTTGCCTCCGCCGTCATCGGAGTCCTCACCGGCCTGGACGACTACCTCTACGCCTGCGGCATAGCGCGTCTGCCGGTGTCCACCTCTTCCCTCATCCAAGCCTCGCACCTCGCCTTCACCGCCGTCTTCGCCTTCCTCCTCGTCAGGCACAGGTTCACGCCGTACTCCGTCAACGCCGTCGTGCTGCTCACCGTGGCCGCGGTGGTCCTGGCGCTGCGCTCCGGCGGGGACCGTCCGAGCGGTGAGTCGACGCGGCAGTATGTGATCGGGTTTGTTATGATACTGGCGGCTGCGGCGCTGTATGGATTTGTTCTGCCGTTGATGGAGTTGGTGTACAAACGGAGCAAGCAACGTATTACGTACTCTTTAGTCATGGAGATTCAGCTTGTCATGTGCTTCTTTGCTACCTTCTTCTGCGTCATTGGAATGATAATCAATAATGACTTCAAGGTGATATCGCGAGAAGCCAAAAATTATAAGCTTGGGGAAACCAAGTACTATGTTGTGCTGGTGTGGGGTGCAATAATGTGGCAGTTGTTCTTCTTGGGAGCAATAGGGGTTATCTTTTGCGCCTCTTCTTTGTTTTCTGGTATTATAATTGCTGCTTTTCTTCCAGTAACGGAGGTTTTGGCTGTTATTCTTTACAAAGAGAGTTTTCAAGCAGAGAAAGGGGTTGCTTTGGTGCTCTCTCTCTGGGGGTTTGCGTCCTACTTCTATGGAGAGATTAAACAAGACAGGAAAAAGAACAAGAATCGTTGTCCACAAACAGAGTTACctcaaactcaaactcaaactcaaactcGTCCTTCCAACGCATGA 1056 0.4924 MKKVLLLVNSILLAIGTSGGPLVMRLYFIHGGNRIWLSSFLETAAFPIILIPLAITHINHHNHHHQTKPNLISMKPPLFLASAVIGVLTGLDDYLYACGIARLPVSTSSLIQASHLAFTAVFAFLLVRHRFTPYSVNAVVLLTVAAVVLALRSGGDRPSGESTRQYVIGFVMILAAAALYGFVLPLMELVYKRSKQRITYSLVMEIQLVMCFFATFFCVIGMIINNDFKVISREAKNYKLGETKYYVVLVWGAIMWQLFFLGAIGVIFCASSLFSGIIIAAFLPVTEVLAVILYKESFQAEKGVALVLSLWGFASYFYGEIKQDRKKNKNRCPQTELPQTQTQTQTRPSNA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01094 351 PANTHER OS09G0467300 PROTEIN-RELATED 1 342 IPR030182 GO:0015211|GO:0016021
Cca05g01094 351 PANTHER PURINE PERMEASE 1 342 - -
Cca05g01094 351 Pfam Purine nucleobase transmembrane transport 5 326 - -
Cca05g01094 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 75 154 - -
Cca05g01094 351 MobiDBLite consensus disorder prediction 328 351 - -
Cca05g01094 351 MobiDBLite consensus disorder prediction 333 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01094 Cca-Chr5 28007814 28009991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01094 1 338 Organic Solute Cotransporters AT1G28230 58.501 5.04e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01094 - - ccaj:109789210 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01094 05 28007814 28009991 Cca05g01094 05 28007814 28009991 ECH
Cca05g01094 05 28007814 28009991 Cca03g01277 03 30293583 30295291 PCT