Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01069 ATGTCCACTTTCCTCTTCAAGATTTTCTTTCTATTCTGTGTTTTTCACATCTCTTTGGCTACCAGGAGGTTGAACGAGGTGGTTCAGGACCAAACTCAGCTTCTCCATTACCACAATGGCCCTCTTCTCTCTGGCCAAATCTCCATCAACCTCATTTGGTACGGTCACTTCAAACCTTCCCAAAAGGCAATAGTCTCCGATTTTATCACCTCCCTCTCACCCTCCTCCCCTCACACCTCCCAACCATCCGTCGCCACGTGGTGGAAGACCACCGACAAATACTACCACCTCACCGCCAAAAAGAAAACCACCCCTCTTTCTCTTTCGCTCGGTAAACAAATTCTCGACGAAGGCTACTCGCTGGGGAAATCCCTCACCAGCAAAGACCTCATCGAGCTGGCTTCCAAGGGCGAACAGAAAAACGCCATCAACGTGGTTCTAACTTCGGCTGACGTGGCAGTGGAGGGTTTCTGCATGAGCCGATGCGGGACCCACGGTTCTTCCTCGGCAAGCCACGTGAAGAACAAGAACTACAAGTTCGCTTACGTTTGGGTGGGGAACTCCGAGAGCCAGTGCCCGGGGCAATGCGCGTGGCCCTTTCACCAGCCAGTTTATGGGCCGCAGGGCCCACCGTTGGTTTCGCCGAACAACGACGTGGGCCTTGATGGGATGGTGATGAACCTGGGTAGCCTCTTGGCCGGGACCGTCACGAACCCCTTTGGAAATGGGTTCTTCGAGGGGCCGGCTGAGGCGCCGCTAGAGGCTGCGTCTGCGTGCCCTGGGGTTTATGGGAAAGGGGCTTACCCTGGTTACGCTGGGAAGCTGCTCCTGGACTCTTCTACTGGCGCTAGCTACAATGCGCATGCTGCCAACGGAAGGAAGTACCTGCTTCCTGCTTTGTATGATCCTGCCACGTCATCCTGCTCCACGCTAGTGTGA 939 0.5495 MSTFLFKIFFLFCVFHISLATRRLNEVVQDQTQLLHYHNGPLLSGQISINLIWYGHFKPSQKAIVSDFITSLSPSSPHTSQPSVATWWKTTDKYYHLTAKKKTTPLSLSLGKQILDEGYSLGKSLTSKDLIELASKGEQKNAINVVLTSADVAVEGFCMSRCGTHGSSSASHVKNKNYKFAYVWVGNSESQCPGQCAWPFHQPVYGPQGPPLVSPNNDVGLDGMVMNLGSLLAGTVTNPFGNGFFEGPAEAPLEAASACPGVYGKGAYPGYAGKLLLDSSTGASYNAHAANGRKYLLPALYDPATSSCSTLV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01069 312 Pfam Phosphate-induced protein 1 conserved region 35 311 IPR006766 -
Cca05g01069 312 PANTHER PROTEIN EXORDIUM-LIKE 5 3 312 IPR006766 -
Cca05g01069 312 PANTHER PROTEIN EXORDIUM-RELATED 3 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01069 Cca-Chr5 27539853 27541624 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01069 - - gmx:100791695 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01069 05 27539853 27541624 Cca05g01069 05 27539853 27541624 ECH
Cca05g01069 05 27539853 27541624 Cca03g01247 03 29710829 29712249 PCT