Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01247 ATGATAATTGGTGGTGACCACCGTTTGGTTTTGAGGCTGGCACTTGTTGTTGCCTCGTTTGTTGTACTTGTTCAGTCCCATGTCCCAAACACTTGGGAAGCCACAACGTTCAATCGCATGCTGGCTTTGGTTCAGCCAGACCCCATTGTCCTCAAATACCACAACGGTTCACTCCTTAAGGGAAACGTTACCGTTCATGTCCACTGGTACGGTAACTTCACCCCCACACACCGTTCCGTAATCGTTGACTTCATCCAATCCCTTAGTTCCATTCCCCACTCTCACCATTCACCACCCTCCGTGTTTTCGTGGTGGCGAACCACCGCCAGGTACAGGGGAGGCCCATGCACCCTCACCGTAGGGAACCAAACCCTCGACCCCACCTACTCCCTCGGCAAATCACTCAACACATCCCATCTCCGCGCCCTCGCTTCGACCCAAAAGGGCCAAAACCCAACTAAAGGAAACGCCATCCACGTGGTGCTAACTTCTGCTGACGTGGCAGTCGAGGGTTTCTGCATGAGCCGATGTGGGACCCATGGCTCGGGTCGGGTACGTAACAATAGGGTCGTGTTCCTTTGGGTGGGTAACCCGGCGACGCAGTGTCCCGGGGAGTGCGCGTGGCCGTTCCACCAGCCGGTGTACGGCCCGCAGACGCCGCCGCTGGTTCCGCCGAACGGCGACGTCGGCGTGGACGGGATGGTGATCAGTTTGGCGACGGTTGTGGCCGGAGCGGTGACGAACCCGTTCGGGAATGGGTACTACCAAGGGTCGGTGATTGCGCCGTTGGAGGCGGTGTCGACGTGCACCGGAATATTCGGAAAAGGGGCGTACCCGGGTTACACGGGTGATGTGTTAGTGGATAATGTAACGGGAGCTAGCTATAATGTAGTGGGTGTGCACGGTCGCAAGTTTCTGTTGCCGGCGATGTGGGACCCCGTTACATCTACATGCAAAACGCTCGTCTGA 969 0.5707 MIIGGDHRLVLRLALVVASFVVLVQSHVPNTWEATTFNRMLALVQPDPIVLKYHNGSLLKGNVTVHVHWYGNFTPTHRSVIVDFIQSLSSIPHSHHSPPSVFSWWRTTARYRGGPCTLTVGNQTLDPTYSLGKSLNTSHLRALASTQKGQNPTKGNAIHVVLTSADVAVEGFCMSRCGTHGSGRVRNNRVVFLWVGNPATQCPGECAWPFHQPVYGPQTPPLVPPNGDVGVDGMVISLATVVAGAVTNPFGNGYYQGSVIAPLEAVSTCTGIFGKGAYPGYTGDVLVDNVTGASYNVVGVHGRKFLLPAMWDPVTSTCKTLV 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01247 322 PANTHER PROTEIN EXORDIUM-LIKE 5 19 322 IPR006766 -
Cca03g01247 322 Pfam Phosphate-induced protein 1 conserved region 51 321 IPR006766 -
Cca03g01247 322 PANTHER PROTEIN EXORDIUM-LIKE 2 19 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01247 Cca-Chr3 29710829 29712249 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01247 - - gmx:100779037 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01247 03 29710829 29712249 Cca03g01247 03 29710829 29712249 ECH
Cca05g01069 05 27539853 27541624 Cca03g01247 03 29710829 29712249 PCT