Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01057 ATGGTCTCCTTTCACAAAGCGCTCGCCCAAACCCCAATAACTCAAGTTCCTGCACAATTTGAATCTCCACCAAGGAAGAGAAAGTTGGAAGAGGAGACACTCACTGAAGAATTCTTCAAGCATGATCCAACGGATGCAGAGAAGAGAAAATCCATCTTTGATATAGAGCTGCACCTCGAGACACCATTACCTTCACATAAATTGCAACAATACCTCACTATTCAGTCAGGGCAGATACACTTGTGCAACACGATGATGAACTTGAAAACACCATACTCAGAGAGAAACCCTGATACTGAAGCACCATCTCTTGGTCAAATGAGCCTGGACCTTGAGCTGAACTTGACGTGTGAGTCACTGAAGAAAAACGAAGGCAGTTATGACATGAAGGAGAAGAAGAAGCATGGTCTGTTGATTGAATCGAGCAATTGTGAAAAGGATGATTCGTGTGTTTTAACAAGACCTCCATCGTGGCTATCATCAGAGGGAGATCACAAAGAGATGATTGCAACGGTTTGTATGAGGTGTCACATGTTGGTAATGCTGTGCAAGTCATCTCCTGCTTGTCCTAACTGCAAATTCATGCATCCACCGGATCAGAACCCTTCAAAGTTCTTGAAGAGAAAGAAGGTGCAGCCTCTGTTGTGTTAA 651 0.4363 MVSFHKALAQTPITQVPAQFESPPRKRKLEEETLTEEFFKHDPTDAEKRKSIFDIELHLETPLPSHKLQQYLTIQSGQIHLCNTMMNLKTPYSERNPDTEAPSLGQMSLDLELNLTCESLKKNEGSYDMKEKKKHGLLIESSNCEKDDSCVLTRPPSWLSSEGDHKEMIATVCMRCHMLVMLCKSSPACPNCKFMHPPDQNPSKFLKRKKVQPLLC 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01057 216 PANTHER F16L1.2 PROTEIN 1 216 - -
Cca05g01057 216 PANTHER BOMB/KIRA PROTEINS 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01057 Cca-Chr5 27332194 27333730 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01057 - - gmx:100784445 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01057 05 27332194 27333730 Cca05g01057 05 27332194 27333730 ECH
Cca05g01057 05 27332194 27333730 Cca03g01232 03 29346156 29347490 PCT