Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01232 ATGGTATCCTTTCACAAAGCGCTGGCCGAGAGTACAAGGCCTGAAATCCATGAAGAATTTGAAGCATCATCAAAGAAGAGAAAGTGGGAAGAGCCATTTGCTGAAGATTTCTTCAAGGATCAAACAACTCTAGAGAAAAGCAAATCCGTCTTTGATATAGACCTTCACCCTGACACACCTTTTTCTTCGGATAAATGGCGTCAATACCTCTCTATTCAGTCAGGGCAGATACAATTGTGTAACCCAACAACAACAACAGAGGACCCCAAAAGAAACCCCGAGCCACCTATTTCTAATCACATGAGTTTAGACCTTGAGCTGAATTTGACATGTGAATCACTGAGGAAAAAAGAAGAGAATTCTGGGGGTTTGAGTGAACGTGATGATCCGTTTATTGAATCAACCAAGTGTAAGAAAGTTTCAGATGGTATAAATATTCGTTCTCCCTCGTGGTTGTCATCATCCGAGGATGATTACAAAGAGATGGTTGCAACAGTTTGCATGAGATGCCACATGTTGGTAATGCTATGCAAGTCATCTCCTTCATGTCCCAACTGCAAATTCATGCACCCTCCAGATCAGAACCCGTCAAAATTCTTGAAGAGAAGGTGCAGTCTCCTCTGCTAG 627 0.4226 MVSFHKALAESTRPEIHEEFEASSKKRKWEEPFAEDFFKDQTTLEKSKSVFDIDLHPDTPFSSDKWRQYLSIQSGQIQLCNPTTTTEDPKRNPEPPISNHMSLDLELNLTCESLRKKEENSGGLSERDDPFIESTKCKKVSDGINIRSPSWLSSSEDDYKEMVATVCMRCHMLVMLCKSSPSCPNCKFMHPPDQNPSKFLKRRCSLLC 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01232 208 MobiDBLite consensus disorder prediction 1 27 - -
Cca03g01232 208 PANTHER BOMB/KIRA PROTEINS 1 208 - -
Cca03g01232 208 MobiDBLite consensus disorder prediction 80 100 - -
Cca03g01232 208 PANTHER F16L1.2 PROTEIN 1 208 - -
Cca03g01232 208 MobiDBLite consensus disorder prediction 10 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01232 Cca-Chr3 29346156 29347490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01232 - - gmx:100306574 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01232 03 29346156 29347490 Cca03g01232 03 29346156 29347490 ECH
Cca05g01057 05 27332194 27333730 Cca03g01232 03 29346156 29347490 PCT