Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01011 ATGAGCAGTGAAAATCATCACCATCCCCATCATTACTTTTACCATCAGAACCTGCATATCCATCACAGAACCACATTCCTGCCTATGCTATGTTCAAGGCCATCCATCAAGGATGTGAGTCTTCCACAGTGGAGAGACCCCCCAGGATCCTTCTCCAATGACCCTTTGTCCCCAAGAATTGGTTGCATGGGTCAAGTGAAGAGGCACAACAAAATAGTTGGACTTCTCACAACCAAAAGCAACACCTCCAACATCTCCATTTCCCCTAGTCTCAAGTATTCCAAGCTCAAAAAACTCTTCTCTGGCAAAAACATAAGCACCAGCACCACCAATGCTACTGCTCCTACTGCCTCCAGCTGTAGAAGTAGGCCAAGAGGGTCAGTGAATAGTGCTAATGTGCCAAGGAACCATAAGCACAAGTGTAGTAGGAATGAGAATGTTGTTCCCATAAGCATTGAAAATATGGATCCTCCTCTACCTGTGATCAAGAGAGTGCAGAAGCCAGAGGAAGAAAAACAGGTGGATAGTCTTTGGAAAAGAAGGTCAGGTGGTGCTGCATTGAAAAGTTTACAGCTTCAACAGATTCACCATTCAAGACATCATCCTCAGATCACAAGTGTTTGA 624 0.4471 MSSENHHHPHHYFYHQNLHIHHRTTFLPMLCSRPSIKDVSLPQWRDPPGSFSNDPLSPRIGCMGQVKRHNKIVGLLTTKSNTSNISISPSLKYSKLKKLFSGKNISTSTTNATAPTASSCRSRPRGSVNSANVPRNHKHKCSRNENVVPISIENMDPPLPVIKRVQKPEEEKQVDSLWKRRSGGAALKSLQLQQIHHSRHHPQITSV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01011 207 MobiDBLite consensus disorder prediction 107 142 - -
Cca05g01011 207 PANTHER MYOTUBULARIN-LIKE PROTEIN 1 207 - -
Cca05g01011 207 MobiDBLite consensus disorder prediction 107 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01011 Cca-Chr5 26419675 26420781 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01011 - - gmx:100806174 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01011 05 26419675 26420781 Cca05g01011 05 26419675 26420781 ECH
Cca05g01011 05 26419675 26420781 Cca03g01182 03 28317581 28318937 PCT