Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01182 ATGGTGAATGAAAACCAACACCATCAGTTATACTATCAAAAGAGCACATTCCTTCCAATGCTTTGTTCACGGCCTTCGATCAAAGAAGTGACTCTTCCACGGCTGAGAGACCAATCTAGTTCCTCTGGCAACGACCCTTTGTCCCCAAGAATCAGTTGCATGGGTCAGGTGAAGAGAAACAACAAGATAGCCACCTCACACAGACTCACTTTCACAACCAAAACTAACACAAACACTACTTCTTCCCCACTTGTCAAATACAAATACTCCAAGCTCAAGAAACTCTTCTCTGGCAAAAACTTCATCATTaccacccccaatacaaccacttccaccaccacAATCTCAACCTGTGGATCAAGAAAACCAGTGGCCAAACACCAAAGAAATGAGAATAGTAACAATGTTGTTTGCATAAGCATTGAGGAAATGGATCCTCCTTTGCCAGTGGTCAAAAAATTGGAAGATGCAAAGGAGGTGGATAGTCTCTGGAAAAGAAGATCAGGTACAGCAAGGCCTGCACTAAAAAATTTGCAGCTTCATCAGATTCATCACCCAAGGATTTCTCTTCAGCCTCCAACTGTTTGA 588 0.398 MVNENQHHQLYYQKSTFLPMLCSRPSIKEVTLPRLRDQSSSSGNDPLSPRISCMGQVKRNNKIATSHRLTFTTKTNTNTTSSPLVKYKYSKLKKLFSGKNFIITTPNTTTSTTTISTCGSRKPVAKHQRNENSNNVVCISIEEMDPPLPVVKKLEDAKEVDSLWKRRSGTARPALKNLQLHQIHHPRISLQPPTV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01182 195 PANTHER MYOTUBULARIN-LIKE PROTEIN 7 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01182 Cca-Chr3 28317581 28318937 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01182 - - gmx:100776177 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01182 03 28317581 28318937 Cca03g01182 03 28317581 28318937 ECH
Cca05g01011 05 26419675 26420781 Cca03g01182 03 28317581 28318937 PCT