Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00845 ATGATCATTTCTCCTCCCTCATTCACCAACAAACCAAACCATAACATGGCCTCGGAGTCACACCATCACGTGCAAGGCCTAACACCCGAAGAGTTCATGGAACTCGAACCCATCATAAAAACCTACCACATTTTTGAACGCCCTCCCAACACATGTTTTTCCATAATAACGTACCGCATCGATGCTCCCGCGAGCATCGTGTGGCCGTTTGTGAGGAGCTTCGAGAGCCCTCAGAAGTACAAGCACTTCATCAAGGGCTGCAACATGAGAGGAGATGGGGGTGTGGGGAGCATAAGGGAAGTCACCGTCGTCTCGGGCCTCCCCGCGTCAACCAGCACGGAGAGGCTCGAGATTTTGGACGATGACAAACATGTCCTTAGCTTCAGAGTGGTCGGTGGTGAACACCGACTCAAGAACTATCGTTCTGTGACGTCGGTGAACGAGTTCAACAAAGAGGGTAAGGTTTACACCATTGTGTTGGAGTCGTATATCGTAGACATACCCGAAGGGAATACGGAAGAGGATACCAAGATGTTTGTGGACACGGTGGTCAAACTCAACCTTCAGAAACTTGGGGTCGTTGCTATGGCTACATCAATGCATGGACAAGAATAG 615 0.4992 MIISPPSFTNKPNHNMASESHHHVQGLTPEEFMELEPIIKTYHIFERPPNTCFSIITYRIDAPASIVWPFVRSFESPQKYKHFIKGCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDDKHVLSFRVVGGEHRLKNYRSVTSVNEFNKEGKVYTIVLESYIVDIPEGNTEEDTKMFVDTVVKLNLQKLGVVAMATSMHGQE 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00845 204 SUPERFAMILY Bet v1-like 54 191 - -
Cca05g00845 204 PANTHER - 29 199 - -
Cca05g00845 204 MobiDBLite consensus disorder prediction 1 25 - -
Cca05g00845 204 Gene3D - 14 204 IPR023393 -
Cca05g00845 204 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 29 199 - -
Cca05g00845 204 MobiDBLite consensus disorder prediction 1 22 - -
Cca05g00845 204 CDD PYR_PYL_RCAR_like 59 191 - -
Cca05g00845 204 Pfam Polyketide cyclase / dehydrase and lipid transport 59 191 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00845 Cca-Chr5 23110807 23111421 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00845 K14496 - gmx:100778183 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00845 05 23110807 23111421 Cca05g00845 05 23110807 23111421 ECH
Cca05g00845 05 23110807 23111421 Cca03g01742 03 36540272 36541173 PCT