Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00819 ATGCAGGGCCTACACCGCTGCTCAAACGACGTCGTCCAACTAGAcctctccaccaccaactcctcctccacctcctcctcctcttcctccctctccATCGACGTGGACGAGTCCACCGAGGCCCGCATCACGCGCCTCATATCGGAGCACCCCGTCATCATCTTCACGCGCTCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATCGGCGTCAACCCCACCGTCATCGAATTGGACGACCATGAGATCGCCGCCCTCCCTCACCCCTCCCCCACTCCCGCCGTCTTCATCGGCGGCGCCTCCATCGGCGGCCTTGAGTCCCTCGTCGCCCTCCACGTCAGCGGCCACCTCGTCCCCAAGCTCGTCCAAGTCGGGGCTCTCTGGCGTTTCTATGAATGA 411 0.5547 MQGLHRCSNDVVQLDLSTTNSSSTSSSSSSLSIDVDESTEARITRLISEHPVIIFTRSSCCMCHVMKKLLATIGVNPTVIELDDHEIAALPHPSPTPAVFIGGASIGGLESLVALHVSGHLVPKLVQVGALWRFYE 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00819 136 ProSiteProfiles Glutaredoxin domain profile. 40 132 - -
Cca05g00819 136 TIGRFAM GlrX-like_plant: glutaredoxin-like family 44 132 IPR011905 -
Cca05g00819 136 Gene3D Glutaredoxin 33 133 - -
Cca05g00819 136 Pfam Glutaredoxin 52 104 IPR002109 -
Cca05g00819 136 PANTHER GLUTAREDOXIN-C6 6 132 - -
Cca05g00819 136 SUPERFAMILY Thioredoxin-like 41 132 IPR036249 -
Cca05g00819 136 CDD GRX_GRXh_1_2_like 51 124 - -
Cca05g00819 136 PANTHER GLUTAREDOXIN 6 132 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00819 Cca-Chr5 22613464 22614111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00819 43 132 Miscellaneous Gene Families AT4G15700 42.857 3.61e-24 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00819 - - gmx:100778024 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00819 05 22613464 22614111 Cca03g01731 03 36442575 36443379 PCT