Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01731 ATGCAAGGCATAAACGACGTCGTAGGGGAGGTGACTGCCATCACTATGACTATCACCAACTCCTCCTCTTCCCTATCCATGGAGCTCGACGAGTCAACGGAGACCAGAATCCAACGCCTCATATCGGAGCATCCCGTCATCATCTTCACCCGATCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATCGGCGTCCACCCCACCGTCATCGAATTAGACGACAACGAGATCGCTGCCCTTCCTCTCTCCGACACCACCGCCCCTGCCGCCTTCATCGGCGGCACCTGCATCGGCGGCCTTGAGTCCCTCGTCGCCCTCCACGTCACCGGCCACCTCATCCCCAAACTCGTCCAAGTCGGCGCTCTCTGGATAGAAGATAATTTAGGTGAGGAGGAATGGCATGGCTTCATAAATGATACTAATAATAACGCGCTTAAGCTTGCTGCTTAG 462 0.5584 MQGINDVVGEVTAITMTITNSSSSLSMELDESTETRIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPTVIELDDNEIAALPLSDTTAPAAFIGGTCIGGLESLVALHVTGHLIPKLVQVGALWIEDNLGEEEWHGFINDTNNNALKLAA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01731 153 Pfam Glutaredoxin 46 101 IPR002109 -
Cca03g01731 153 ProSiteProfiles Glutaredoxin domain profile. 34 127 - -
Cca03g01731 153 PANTHER GLUTAREDOXIN-C6 11 127 - -
Cca03g01731 153 TIGRFAM GlrX-like_plant: glutaredoxin-like family 37 128 IPR011905 -
Cca03g01731 153 CDD GRX_GRXh_1_2_like 45 119 - -
Cca03g01731 153 PANTHER GLUTAREDOXIN 11 127 IPR011905 -
Cca03g01731 153 SUPERFAMILY Thioredoxin-like 33 128 IPR036249 -
Cca03g01731 153 Gene3D Glutaredoxin 27 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01731 Cca-Chr3 36442575 36443379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01731 36 128 Miscellaneous Gene Families AT4G15660 42.574 5.48e-23 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01731 - K03676 gmx:100791969 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00819 05 22613464 22614111 Cca03g01731 03 36442575 36443379 PCT