Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00812 ATGGAGGACTTCAACTACAACAGATCAAGGTCTCATGGAGGTGGACAAATGATGCAGATGGAGAGGTACCATGGAGGAGCACCACCACCAAGGCCTTATGATCTCAGGTCCTATAGTGTTTCCTATGCACAACCTCAAATGGGTCCAAACAAGGACTTGAATAAGATGAAGAAAGGAAAAAGCATGTCCAAGTCTTGGAGCTTAGCTGATCCTGAGTTTCAAAGGAAGAAAAGGGTTGCTAGCTATAAAATGTATTCTGTGGAAGGAAAGGTCAAAGGCTCCTTTAGAAAGAGCTTTAGGTGGCTTAAGGATAGGTACTGGCAAGTGGTTTATGGCTGGTGGTGA 345 0.4435 MEDFNYNRSRSHGGGQMMQMERYHGGAPPPRPYDLRSYSVSYAQPQMGPNKDLNKMKKGKSMSKSWSLADPEFQRKKRVASYKMYSVEGKVKGSFRKSFRWLKDRYWQVVYGWW 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00812 114 MobiDBLite consensus disorder prediction 1 32 - -
Cca05g00812 114 MobiDBLite consensus disorder prediction 45 69 - -
Cca05g00812 114 Pfam Domain of unknown function (DUF3511) 69 112 IPR021899 -
Cca05g00812 114 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 1 113 - -
Cca05g00812 114 PANTHER DUF3511 DOMAIN PROTEIN 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00812 Cca-Chr5 22495328 22495863 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00812 - - gmx:100780149 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00812 05 22495328 22495863 Cca03g01721 03 36335296 36336122 PCT