Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01721 ATGGAGGACTTTCAAAGATCAAGGTCCTATGCACATGGGCAAATGATGCAGATTGAGAGCTACTATGGAGCTCCTAGGCCCTATGATCTGAGAAGTTATAGTGCTTCGTATTCACATGCTCATATGGGTCCTAGTCCTAGGGACTTGAAGTTGAAGAAAGGGAAAAGCATTTCAGCAGGGTCTTCTTTGTCAAAGTCTTGGAGCATCGCTGATCCTGAGCTTCAGAGGAAGAAGAGGGTTGCCAGCTACAAAATGTATTCTGTCGAAGGTAAGATCAAAGGATCCTTCAGAAACAGCTTCAGGTGGCTCAAGAACAAGTATTCTCAAGTGGTTTATGGTTGGTAG 345 0.4435 MEDFQRSRSYAHGQMMQIESYYGAPRPYDLRSYSASYSHAHMGPSPRDLKLKKGKSISAGSSLSKSWSIADPELQRKKRVASYKMYSVEGKIKGSFRNSFRWLKNKYSQVVYGW 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01721 114 Pfam Domain of unknown function (DUF3511) 70 113 IPR021899 -
Cca03g01721 114 PANTHER DUF3511 DOMAIN PROTEIN 1 114 - -
Cca03g01721 114 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01721 Cca-Chr3 36335296 36336122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01721 - - gmx:100305934 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00812 05 22495328 22495863 Cca03g01721 03 36335296 36336122 PCT