Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00806 ATGGAGGAGCAGTGTAGTACGTCGTCGTCGTCGATCGGGAGGAACAGCGACGTGTCGTCGGAGAGATCAACGGAGGAAGGAGAAAACGAGGTGGAGAGTCCATTCCATGGACCTTTGCTTGCTATGGAAACTTTGGAAGAGGTTCTTCCCATCAGGAGAGGCATTTCGAACTTCTACAATGGCAAGTCAAAGTCATTCACGACCCTGGCTGATGCTGTGTCTTCCCCATCAGTGAAAGACATTGCAAAGCCAGAGAATGCTTACGCCAGGAGGCGTAGGAATTTGATGGCATTGAATCACGTTTGGGACAAGAATAGAAATTACCCTTTAAGAAGCAGTGGTGGTGGCATTTGCAAGAGATCAATCAGCTTGAGTAGAAGTACTCTGGCTCTTGCAGTTGCCATGAACAATTCTGACAGTAGCAGTAGTATCACAAGTGAAGATTCTGGCTCCAGCTTGAATTCGTTACCCTCACCCTCACAACTACCACCACTTCATCCGCGAAATAGAATGTCTTCTTCTGGTGCAGCTCCATGCTCTCCCTCCTGGAGATCGTTTTCCTTGGCTGATCTACAACAGCATTGTGCCATTGCTGCAACCATAAAGATATCAAGTTCCTCCATTGGAAATGAAACAGCTCATGGATCATAG 651 0.4731 MEEQCSTSSSSIGRNSDVSSERSTEEGENEVESPFHGPLLAMETLEEVLPIRRGISNFYNGKSKSFTTLADAVSSPSVKDIAKPENAYARRRRNLMALNHVWDKNRNYPLRSSGGGICKRSISLSRSTLALAVAMNNSDSSSSITSEDSGSSLNSLPSPSQLPPLHPRNRMSSSGAAPCSPSWRSFSLADLQQHCAIAATIKISSSSIGNETAHGS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00806 216 PANTHER OS08G0516900 PROTEIN 4 200 - -
Cca05g00806 216 MobiDBLite consensus disorder prediction 139 176 - -
Cca05g00806 216 MobiDBLite consensus disorder prediction 1 18 - -
Cca05g00806 216 PANTHER MYOSIN LIGHT CHAIN KINASE DDB_G0279831 ISOFORM X1-RELATED 4 200 - -
Cca05g00806 216 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00806 Cca-Chr5 22376997 22379880 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00806 - - ccaj:109806498 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00806 05 22376997 22379880 Cca05g00806 05 22376997 22379880 ECH
Cca03g01673 03 35844355 35845585 Cca05g00806 05 22376997 22379880 ECH