Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01673 ATGGAAGGCCAAGCATCCACCTTGTTTAAGGCTGATGAGCAGTGCTCATCTTCTGCTACTTCATCCATCGGGAAGGACAGCCCAGACAATGAGAGTGACAATGATGTTAACAGCTCCTATACATGTCATCCACCTTTCCACAACATCAACTCCCTTCACCTGCTTCTGCCCATCAGAAGGGGCATCTCAAAGTATTATGATGGCAAGTCCAAGTCCTTTACAAGTGTGGCGGATGCTGGATCTGTCAAAGACATTGCAAAACCAGAAAATGCTTACACGAGGAGGCGTAGAAATTTGATGGCCTTCAATCACATTCGAAACATGCCTTTAAGGAGTAATAGTGGAGGCATTTCTAAAAGAACAATAAGCTCGAGCACTTGCCCAAGTGCTGCGGCTCTTGCTTTCGCCATCAACTATGACAGCAGCAGTAGCTTTGCAAGCGAGGACTCATCTTCAAGATCAAATTCGAGGTCGACCCCACCTCCATCCAGTTTCTCAGCCAGGCGATTCTCCTCCTTGGCTGATCTTCAAAATTGTGCCACTGCTGCAACAATAAAAAATGCCTCTGGGAGTGGCAAATGA 582 0.4674 MEGQASTLFKADEQCSSSATSSIGKDSPDNESDNDVNSSYTCHPPFHNINSLHLLLPIRRGISKYYDGKSKSFTSVADAGSVKDIAKPENAYTRRRRNLMAFNHIRNMPLRSNSGGISKRTISSSTCPSAAALAFAINYDSSSSFASEDSSSRSNSRSTPPPSSFSARRFSSLADLQNCATAATIKNASGSGK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01673 193 PANTHER - 11 165 - -
Cca03g01673 193 PANTHER OS08G0516900 PROTEIN 11 165 - -
Cca03g01673 193 MobiDBLite consensus disorder prediction 1 39 - -
Cca03g01673 193 MobiDBLite consensus disorder prediction 144 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01673 Cca-Chr3 35844355 35845585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01673 - - ccaj:109816125 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01673 03 35844355 35845585 Cca03g01673 03 35844355 35845585 ECH
Cca03g01673 03 35844355 35845585 Cca05g00806 05 22376997 22379880 ECH