Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00760 ATGGATCCACTTGTGATTAGGGATGAGAATAGGCCAGCTGATGGCAAGTCTATAAGGTATATATCATCTGAATTGGCTACAGATATTATAATAACTGTTGGTGAAGTTAAGTTTCACCTACACAAGTTCCCTCTACTGTCTAAGAGTAATCAATTACAGAAGTTACTGTCAAAGGCGAATGAAGAGAGTTCTGATGAAATTCAGTTGGATGGTTTTCCTGGTGGCCCCAAGGCCTTTGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTCGTTGTGCAGCTGAGTATCTTGAGATGACAGAGGATATTGATAGAGGAAACTTAATTTTCAAAATTGAGGTGTTTCTTACTTCAAGTATCTTCCGTAGCTGGAAGGATTCTATAATTGTTCTTCAAACTACTAAATCTCTTCTGCCATGGTCTGAGGACCTAAAGATCGTTGGGAGATGTATAGATTCCATAGCCTCTAAAACTTCTGTGGACCCATCAAACATCACTTGGTCTTACACTTATAACCGGAAATTGTCAGAGCTTGATAAAATTGGTGAGGACAAGATAACACCTCATGACAAAATTGAGCCTGTTCCTAAGGATTGGTGGGTTGAAGATATATGTGAGCTGGACATTGATCTTTATAAACGGGTAATGATTACTGTCAGATCTAAGGGAAGAATGGACGGAGTTGTGATTGGCGAGGCATTAAAAACTTATGCTGTAAGATGGTTGCCTGATTCCGTTGATGCATTGGTTTCTGATGCTCATGCTCGGAGGAACAAATCTCTGGTAGAAACAATTGTCTGTTTATTGCCATGTGATAATGGCATGGGCTGTTCATGTAGTTTCTTGCTTAAGTTATTGAAAGTGGCCATATTAGTTGAAGCGGATGAATCATCAAGGGAACAATTGTTGAAGAGCATTGGCCTAAAATTGCATGAAGCTTCTGTCAAAGATTTACTGATTCCAGCAAGGTTTCCCCAGATCACCAAATATGATGTTGATTTGGTGCAAGATCTTTTGAATCTATACACGACTAACATAAAGGGCAGTTGTGATATGGAGGTTGAGGATAAGAAAGATAAAGCAAATGATGAATCTATTTTAGGGCGGAGGCCTTTGTTGAATGTTGGCAAGTTGGTAGACGGTTATCTTGGAGAAATTGCATATGATCCAAATCTCAGCCTCTCTAGTTTTGTTCATTTGTCACAGTCAATTCCAGAGTTTGCTAGACCAAATCATGATGGTCTGTACAGAGCTATAGACATCTACTTAAAGGAGCACCCTGGTTTGTCAAAAGCTGAAAGGAAGAAGATATGCGGACTAATGGATGTCAAGAAATTGACAGTGGATGCATCAATGCACGCCGCACAGAACGAACGCCTTCCTCTTCGAGTTGTGGTGCAAGTTCTCTACTTTGAGCAGATCAGAGCTGCTTCAAATGCTCGTGCAGCTAGTAACAATCCGCGCGATTCTTCAACTGTTAATGGAGATGAGGAGTGTGAGAAAACTGGGAGAGAAAGCTGCCAATCCCTCAACAACCAGATGTGTCACGTGAAGATTAGAGATGATGAGTTCCACAAGAATGGAAAGTTGAACAAGAAGAGTAGCAAAAACAGCAGAAGTGGCATGCAGCTGCTGCCATCTAGGTCAAGGAGAATCTTTGATAAGTTGTGGATTGTGGGCAAAGGACAAGGAGAGAATAGGAGGAGCTCAGAGACTTCAGGGAGTTCCAATAGCCCTACTTCTGTAGTCCCTGGAGATACCAAATCATCTGGTTCATCATTGAGACACAGGAGGCATTCTATCTCTTAG 1842 0.4115 MDPLVIRDENRPADGKSIRYISSELATDIIITVGEVKFHLHKFPLLSKSNQLQKLLSKANEESSDEIQLDGFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDIDRGNLIFKIEVFLTSSIFRSWKDSIIVLQTTKSLLPWSEDLKIVGRCIDSIASKTSVDPSNITWSYTYNRKLSELDKIGEDKITPHDKIEPVPKDWWVEDICELDIDLYKRVMITVRSKGRMDGVVIGEALKTYAVRWLPDSVDALVSDAHARRNKSLVETIVCLLPCDNGMGCSCSFLLKLLKVAILVEADESSREQLLKSIGLKLHEASVKDLLIPARFPQITKYDVDLVQDLLNLYTTNIKGSCDMEVEDKKDKANDESILGRRPLLNVGKLVDGYLGEIAYDPNLSLSSFVHLSQSIPEFARPNHDGLYRAIDIYLKEHPGLSKAERKKICGLMDVKKLTVDASMHAAQNERLPLRVVVQVLYFEQIRAASNARAASNNPRDSSTVNGDEECEKTGRESCQSLNNQMCHVKIRDDEFHKNGKLNKKSSKNSRSGMQLLPSRSRRIFDKLWIVGKGQGENRRSSETSGSSNSPTSVVPGDTKSSGSSLRHRRHSIS 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00760 613 CDD BTB_POZ_NPY3-like 19 122 - -
Cca05g00760 613 MobiDBLite consensus disorder prediction 537 556 - -
Cca05g00760 613 Pfam BTB/POZ domain 24 114 IPR000210 GO:0005515
Cca05g00760 613 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 16 601 IPR029961 GO:0060918|GO:0099402
Cca05g00760 613 SUPERFAMILY POZ domain 21 113 IPR011333 -
Cca05g00760 613 MobiDBLite consensus disorder prediction 576 601 - -
Cca05g00760 613 ProSiteProfiles BTB domain profile. 27 95 IPR000210 GO:0005515
Cca05g00760 613 Gene3D Potassium Channel Kv1.1; Chain A 17 116 IPR011333 -
Cca05g00760 613 MobiDBLite consensus disorder prediction 573 613 - -
Cca05g00760 613 Pfam NPH3 family 209 462 IPR027356 -
Cca05g00760 613 ProSiteProfiles NPH3 domain profile. 209 486 IPR027356 -
Cca05g00760 613 PANTHER OS12G0117600 PROTEIN 16 601 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00760 Cca-Chr5 20964409 20975069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00760 20 519 EF-hand Containing Proteins AT3G44820 34.463 2.12e-95 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00760 - - gmx:100809437 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00760 05 20964409 20975069 Cca05g00760 05 20964409 20975069 ECH
Cca05g00760 05 20964409 20975069 Cca03g01634 03 35378135 35382260 PCT