Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00758 ATGGTCTTATTGAGAGAGCCAAGTTCCCTAGCAATTCTCACACCTATGATCAAAACTATGCTCAAATCCAAGGGTTTTGTGGCTCATTGGTGGAATTTGTTGTTAAGAATACAGAGGCCCTTCAATCTCAGTAAATTACAGGCTGGAAGATACAAAAACCCTGAAGAAAACCCATTCTTCCCAGAACATTTGCCACCATCAATTGTGCCATCTTACCCCTTCACACAGATTTTGCATCCTAGAGCTGCTTCAATTAACATAAACAAGTCCATCTGGAATATGTATTTCCAAGAGTTACTTCCATTGCTTGCTACTTCGGGTGATGATGGTAACTACGCACAAACTGCAGCTAGTGATCTTTCATTATTGCAGGCCATCTCTAGAAGGATTCATTATGGAAAATTTGTAGCTGAGGTAAAATTCAAGGATGCTCCTCAAGACTACGAGCCTTTAATTCGAGCTAAGGACAGAGAAGGGTTGATGAAATTATTGACATTTACAAGTGTTGAAGAGACGGTGAGGAAGAGGGTTGAAAAGAAGGCAACGGTATTTGGGCAGGAAGTAGGTCTTAACAGTGATGATGTTGGCAATGAAAAACGTAAGTTTGAGCCATCAGTGGCTTCTGAGTTGTACCAAAAATGGGTAATACCTCTTACCAAGGAGGTTCAGGTTGAATACCTCTTGCACCGTCTAGACTGA 699 0.412 MVLLREPSSLAILTPMIKTMLKSKGFVAHWWNLLLRIQRPFNLSKLQAGRYKNPEENPFFPEHLPPSIVPSYPFTQILHPRAASININKSIWNMYFQELLPLLATSGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFKDAPQDYEPLIRAKDREGLMKLLTFTSVEETVRKRVEKKATVFGQEVGLNSDDVGNEKRKFEPSVASELYQKWVIPLTKEVQVEYLLHRLD 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00758 232 PANTHER CHORISMATE MUTASE 45 232 - -
Cca05g00758 232 TIGRFAM CM_pl-yst: chorismate mutase 46 232 IPR008238 GO:0004106|GO:0009073
Cca05g00758 232 ProSiteProfiles Chorismate mutase domain profile. 1 232 IPR008238 GO:0004106|GO:0009073
Cca05g00758 232 PANTHER CHORISMATE MUTASE 45 232 IPR008238 GO:0004106|GO:0009073
Cca05g00758 232 SUPERFAMILY Chorismate mutase II 45 232 IPR036263 GO:0046417
Cca05g00758 232 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 27 232 IPR037039 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00758 Cca-Chr5 20945365 20948695 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00758 K01850 - gmx:100791341 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00758 05 20945365 20948695 Cca05g00758 05 20945365 20948695 ECH
Cca05g00758 05 20945365 20948695 Cca03g01631 03 35359843 35362105 PCT