Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00670 ATGTATTCCACCACCACCATCACACCCTTTCAGAGTGTAGGGAAGGAAGTGATGGAAGACTCGGAACAACCGATTTTAGAAACCCATTTTATACTAGAGCAAATTGGCGGGTCGACCATGACGAATGTGGTTATTGTTTCCTTCAATTTGTTGCTGCTTTCTGTCTTCTTCATTTATGCTATAGCAAGTACTAGAAGTGAAGTATCTATGACAAATGAAGCACAACCACTTTCTTACCATATCAAAGCTTTGGAATTCATATGGAGTCACTTGGGTTATCAACATGTGTGGCCAGAAATGGAATTTGGCTGGAGAATAGTTGTTGGCACCTTGATTGGAATCTTGGGGGCGGCATGTGGAAGTGTTGGGGGAGTAGGTGGTGGCGGTATCTTTGTGCCAATGCTAATCCTCATTATTGGGTTTGATCCAAAATCAGCAATTGCTATTTCAAAGTGTATGGTCACAGGAGTTATTTTAAGTGTGATATTTGCTGATTGGATGCTCACTATTCTTTTAATTATTATTTGTTTAGTCACATCAATCAGGGCATTCTTCAAGGGTGCTGAGACATGGAAGAAGGAAACCATAATGAAAGAGGTGAGCTTACTTGGCAACATTTATTGGAAGGAGTTTGTACTTATTTTCTGTGTCTGGCTTGTATATGTTGGTTATACAGTTTCCTGTTCAATCACATATTGGATACTTATTTTGTCACAGGAGTTCGAATCCTGCCTTGTGTATGCACCTGTGTTAAAAAATGGAGGCATCACTTTTCTGTTCTGTAGATACCCCGTAGGATTTCATCTGTACCAAGCAAAAGCCCTATATCAAGGGAGATCTGCAGGAAGACAGTACACACATTGGCCATTGCACCGTCTATTTCTAGCTAGCGTATGTTCGTTGCTGGCTGGAATTGTTGGTGGAATTGTTGGTACAGGTTCTGGATTTGTCATGGGTCCTTTATTTCTTGAAGTGGGAATTGCTCCACAACTCTCTTACTTACCCTTGTGGCTGCCATTGCAGCATTCCTAG 1032 0.4128 MYSTTTITPFQSVGKEVMEDSEQPILETHFILEQIGGSTMTNVVIVSFNLLLLSVFFIYAIASTRSEVSMTNEAQPLSYHIKALEFIWSHLGYQHVWPEMEFGWRIVVGTLIGILGAACGSVGGVGGGGIFVPMLILIIGFDPKSAIAISKCMVTGVILSVIFADWMLTILLIIICLVTSIRAFFKGAETWKKETIMKEVSLLGNIYWKEFVLIFCVWLVYVGYTVSCSITYWILILSQEFESCLVYAPVLKNGGITFLFCRYPVGFHLYQAKALYQGRSAGRQYTHWPLHRLFLASVCSLLAGIVGGIVGTGSGFVMGPLFLEVGIAPQLSYLPLWLPLQHS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00670 343 PANTHER CEREBLON 156 201 - -
Cca05g00670 343 PANTHER CEREBLON 201 332 - -
Cca05g00670 343 PANTHER CEREBLON 40 156 - -
Cca05g00670 343 PANTHER TRANSMEMBRANE PROTEIN TAUE-RELATED 40 156 - -
Cca05g00670 343 PANTHER TRANSMEMBRANE PROTEIN TAUE-RELATED 156 201 - -
Cca05g00670 343 PANTHER TRANSMEMBRANE PROTEIN TAUE-RELATED 201 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00670 Cca-Chr5 16938011 16947383 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00670 - - gmx:100781779 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00670 05 16938011 16947383 Cca03g01442 03 32830736 32835351 PCT