Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01442 ATGGTCGAGTTTGGAACGAGAATGGGATCCTTATGGATGGTGTTGTTCGGTTTTGCATCGGTTTTGGCGGTCGTTTCTGCGGAAAGGAGCATTACGAGAATGGAAGTGCCGAGATTCAATGTTACCCGAGAACGTGAACAGAGTTTTCTCACAAGAGCTGTGAATTTCTTATGGCAATCTGAGGAATCAGGTTATCATCACGTGTGGCCGGATATGAAATTTGGGTGGCAAATTGTTGTGGGCACTTTTGTTGGGTTTTGTGGTGCTGCGTTTGGAAGTGTAGGTGGTGTTGGCGGAGGTGGCATATTCGTTCCTATGCTTAGCTTAATCATTGGATTTGATGCAAAATCATCAACAGCTATCTCAAAATGCATGATCATGGGTGCAGCTGTGTCAACTGTGTACTACAACCTTAAGTTAAGGCATCCAACGTTGAATATGCCAATCATCGACTATGATTTGGCACTTCTCATTCAACCAATGCTCATGCTTGGCATCAGCATTGGAGTGGTTTTCAACGTTGTATTTCCTGATTGGATAGTCACTATATTGCTTATTGTTCTTTTTTTAGGCACATCAACAAAAGCATTCTTTAAGGGAGTTGAAACATGGAAAAAGGAAACCATAATGAAAAAGGAGATCGCAAGGCGACAAGAGTTAAACGGTTCCGGGACTGAAGTGGAGTACAAACCTCTTCCAACTGGACCAAATAGTGGCACTGAAAAGGACACAAAGAAAAATAAGGAAACCTACACGAGTACTTGTTCAACGTTATATTGGGTACTGAACTTGTTACAGGTTCCAATCTCAATTGGGGTAACTGCATATGAGGCAGCTGCATTGTTCAGTGGACGTAGAGTAATTGCTTCCACGGGAGATGAAGGGAAAGATTTTACTGTTCTTCAGCTAGTGATCTATTGTGTCTTTGGTATACTTGCTGGTTTAGTTGGTGGCTTGTTGGGACTAGGAGGAGGATTTGTTATGGGTCCGCTTTTTCTAGAGTTGGGAGTCCCACCTCAGGTGTCAAGTGCCACAGCCACCTTTGCCATGACCTTTTCCTCATCTATGTCTGTTATAGAATACTACTTGCTAAAACGTTTTCCAGTCCCTTATGCTGTTTACTTCACCCTTGTGGCTACTGTTGCTGCATTCGTTGGACAGCATATTGTGAGGAAACTGATCATCCTATTTGGGAGAGCATCTCTTATCATATTTATTCTAGCCTCTACAATATTTGTCAGTGCAATCTCATTAGGTGGAGTTGGCATTGTAAATATGGTACACAAGATCCAAAATCATGAATACATGGGCTTTGAGAATCTCTGCAAGTACGGGTCATAA 1341 0.4236 MVEFGTRMGSLWMVLFGFASVLAVVSAERSITRMEVPRFNVTREREQSFLTRAVNFLWQSEESGYHHVWPDMKFGWQIVVGTFVGFCGAAFGSVGGVGGGGIFVPMLSLIIGFDAKSSTAISKCMIMGAAVSTVYYNLKLRHPTLNMPIIDYDLALLIQPMLMLGISIGVVFNVVFPDWIVTILLIVLFLGTSTKAFFKGVETWKKETIMKKEIARRQELNGSGTEVEYKPLPTGPNSGTEKDTKKNKETYTSTCSTLYWVLNLLQVPISIGVTAYEAAALFSGRRVIASTGDEGKDFTVLQLVIYCVFGILAGLVGGLLGLGGGFVMGPLFLELGVPPQVSSATATFAMTFSSSMSVIEYYLLKRFPVPYAVYFTLVATVAAFVGQHIVRKLIILFGRASLIIFILASTIFVSAISLGGVGIVNMVHKIQNHEYMGFENLCKYGS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01442 446 PANTHER CEREBLON 9 243 - -
Cca03g01442 446 PANTHER CEREBLON 249 444 - -
Cca03g01442 446 Pfam Sulfite exporter TauE/SafE 83 191 IPR002781 GO:0016021
Cca03g01442 446 Pfam Sulfite exporter TauE/SafE 308 412 IPR002781 GO:0016021
Cca03g01442 446 PANTHER SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN 3 9 243 - -
Cca03g01442 446 PANTHER SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN 3 249 444 - -
Cca03g01442 446 MobiDBLite consensus disorder prediction 221 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01442 Cca-Chr3 32830736 32835351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01442 - - gmx:100810784 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01442 03 32830736 32835351 Cca03g01442 03 32830736 32835351 ECH
Cca05g00670 05 16938011 16947383 Cca03g01442 03 32830736 32835351 PCT