Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00573 ATGGAAGGCCGAGTAGAGAACTCTAATGGCGCTACAATTCCCAAGAAATCAAGATCTCTGGATCTTAAAAATCTATATAAATCAAAATTGACAGAAGAGACTGCAAAAAAGTATTTAAAGAGGATTAGCAGTAGTAGTGGGGGTGGTGATGAGAAGAGGAAGAAAAAGAAGGCTAGAAAGGAAGTCTCTTTAAGTAACTTAGAAAATGGTGATGGTAGCAGTGAGTTAAAGTTAGGTGTGAGTCAGATATTGAGTAATGATAGTATGCTCTATAGAGTTTCATTTAGTGTTGGTGGCGCTGATGTTCAGATTCCCAAGAGGAAGAGGAGTTTTGTGGGGAGGAAGAAATCAGAACTTGGTCAAACATCAAATCTGGTGGAGCAGCCCAGTCGTAACATTGGCTATGGTGATCAGGTGCCAAATTTAGGTAGTGATGATTTGGGAAAGGGGGTTGAGTCTTTTAAGATTAAGCATAAGAAAGAATTTGATGAATTTAAGGAAAATAGGAATAGTGATTCAAATTCAGTTCAGCATTTTAAAGAGAATGGGGATCGGGCATCTCATTCTGTTGTAAATAGTGGTGATTCTTCTTTAACAAAGTCACGAAGGAAGAATAGGAAGCGAAAGACTTTGGCTTTTGAGAGAAGTAAGGTTTCCAAGGAGGCTGAACCTTTGGTTTCAAGTTGTAAAATATCTGATGATTTGCAAGATGAGGAGGAAAATCTGGAGGAGAATGCAGCTAGGATGCTATCTTCAAGGTTTGATCCAAGCTGTACTGGATTTTCTAACAAAGGTTCAAATGGTTTGTTCTTTTTCCAATCATCTTGTCAAAGTATTGTTAACCATGGTTTAAAGTCCCAGTCAGGTTCTGAATCAGCATCAGCTGATACTGATGGCAGGGTTTTGAGGCCTAGGAAACAATATAAAAACAAAGGTAATTCCAGGAAGAGGCGCCATTTTTATGAAATTCTTTTAGGTGATGTGAATGCATATTGGGTACTGAACCGGAGAATTAAAATTTTTTGGCCTTTGGACCAGAGTTGGTATCATGGCCTTGTGGATGACTATGATGAAGGAAACAAGTATTACCATATCAAATATGATGATCGAGATGAAGAATGGGTTAATCTCCATACTGAGAGGTTCAAACTCTTGTTACTTCGTAGTGAAGTTCCTGGAATTGCAAAGGGTGGAGGAGCCTTCATGAAACGTAGAAGTTCTGATCACCaaaagaaaagcaaattcagaaaagaaagacaaagaacagaaGAAAATACAGAGGATGATCGTTGTGGTGGGAGCAGTATGGACTCAGAACCTATAATTTCGTGGTTGGCTCGATCTTCTCATCGGCTTGGATCTTCTTTTCAAGGCAGCAAGAAACAAAAAACTTCTGTTGCACCTTTATCATTCTTATATGACGAACCTGTTACAGCAAAGGGATATTTAGCTAAGAGTTCTTCAAGGGGTGTTAAAAACAATTTGTCTGGTGGTTCTGTATCACAAGATAAATTGAGTGATGGTTTTAGGGAGAAGTCCTCATTACAGAGCACCACTTGCATTAAAGATGGAAAGCAACCTATTGTCTATTTCAGAAGGCGGATTCGAAAGCCAGCTCCAATATCCCCTCATATCTCTGAAGAAAACCATGCTATTATAAGTGCATCTGGTTCTGTTTCCTATGACCATATGTTTGGTGGTGTTGAGAATATGAAAGACCAAAGCGACAGCAGGGTTGAGATTGAGGGTCCATTGTTCTTCACTTTCAAGGCGGGAGTATCAAAACTTTTTTGGGACATGGAGTCAGTATCATTCAAATTTCACTTAAACTTTCCAACACGTTTGGTGTTGACCGACTATTTTCAATCTGAAAATTTGTGGTTGCTTTATACTGTTTTGCTGCTTCAGTATGGTACAATTATGACCAAGTGGCCAAGGGTTTGTTTGGAGATGCTATTTGTTGATAATGTGGTTGGGTTGAGGTTTCTATTATTTGAAGGCTGCTTGAACATGGCTGCAGCCTTTGTCTTTTATGTCCTTAGGGTATTTCATCAACCTGCTCGTCAAGGGAAGTATGTTGACTTTCAGTTTCCAAGTACATCTATTGGATTCAAGTTTTCTAGTGTTCATGTTTTTAAGAAGCCACTTGTGTTCGAGTTCTACAATTTCTTTGAAGTCAAGAATTCAAAGTGGATGTGCTTAGATTCTAAGTTTAAGAGGCACTGCCTGTTCAGCAAGCAGCTTCATCTTTCTGAATGCACATATGATAACATCCAGGCACTTCAAAATGAATCAAGTGGGTTTTCCATTACATCTATCAGTGGTTCCTCCTCAGTCAAGGTGCAAAAGAGGAGTAGGCAAGGGATTAACATCATGGGTGTTTCCAAGTTGTCCACTCAAGCTGATACTCATCAGTATTTTGATGCTGGTGAGAGGGAACTTCCTCCATTTGCTCTCTCTTTTGCTGCAGCACCTACATTTTTTCTTTGTTTGCATCTAAAGTTGCTGTTGGAGCAGTCTGCAACTCGTGTAAACTTTTATGATCAGGAAGACCCTAGTTTGATGGCAGATGGATGCACTAGCACCAATGAATGCTCAAACAGGAATTCCGAAATTATTCTGAGGAAAGATATGGAGATTTTGTCAAATGGTGTTGCAACTGATGGAAGGTCTTGTGCTGACTCAGATTGTCCCTCAACTTTCAGTGATCAAATTCTCTCTCAAAATTACAAGAACATTGGTCTTAACAGTGCTGGTATTTCTATTTCCCATGGTTCTGAGAGGCTTGGTACAACTCACTTACTCGAATGGCAATCCCACCATTTGGGACAAGAATTAGGCTCTTTACCTTCAAGTTCTATAATAAGTCAAGATAAGGCTGATGATGGTTCTCATTCTTTTATTTGTGATCTCAGTATCCAAATTCCAGCTGTTGATCAATTTGAGAAAACTGGTGATGGTGATTTATGTGATACAAAACACTCTCCTGATTTCTCTTGTAATATAAATGGAGGCATTATTCCAAGATCCAATCCAACTGCTCGCAGAAGTTCTTGGTATCGGAACCGGAATAGTTCCTTGTCATTGGGATTTCAGTCTCATGCGTGGTCTGAAGATTTTAGCAATGGACCTAGAAAACCACGTACACAAGTATCATACTCTGTGCCTTCTGCAGGCTATGAATTCAGTTCAAGGCAGAAAAACCTTCACCAGAAAGGGCTTCCTCACAAACGAATTAGAAAGGCTAGTGAGAAGAAGTCATCAGAGGTTGCTAGGGGCCTTGAAAAACATTTCGAATGCTTATCTTGTGGTGCAAATGTCTTGATTACTCTTGGTGATAAGGGTTGGAGAGAATCTGGGGCTCACGTTGTACTAGAGTTGTTTGACAACAATGAGTGGAGACTTTCTGTGAAACTTTTAGGAATTACTAGGTATTCATACAAAGCCCATCAGTTTTTGCAGCCTGGATCAACAAATCGATACACACATGCAATGATGTGGAAAGGAGGGAAGGATTGGATCTTGGAATTTCCTGATAGGAGTCAGTGGGCCCTTTTCAAGGAGATGCATGAAGAATGCTACAACCGGAACATCCGTGCTGCATCAGTTAAAAACATACCTATTCCTGGTGTTCATTTGATAGAAGAAAATGATGATAATGGATGTGAGGCAACTTTTGTTCGAAGTGGTAAGTACTTCCAACAGGTTGAAACAGATGTTGAGATGGCCTTGGATCCATTCCGCGTTCTGTATGACATGGACAGTGAGGATGAGCAGTGGGTTTCAAATGCTCAAAATTCTCAAAAAGACAACAGTGACTTGAGTTGGATTTCAGAGGAGATGTTTGAGAAGACAATAGACATGTTTGAAAAGGTGGCATATGCTAAGAAGCGTGACCATTTTACTCCTAATGAGATAGAGGAACTCATGGTTAATGTTGGGCCTTTGTGTGTTGTCAAAATCATTTATGACTATTGGCAGCAGAGAAGGCAGAAGAAGGGAATGGCATTAATACGGCACTTTCAGCCCCCACTCTGGGAAATATATCAAAAACAAGTGAGAGAGTGGGAAATAGCCATGACCAAGAACACTGCTCCTTCTAATGGATTCCTGGACAAGGTTACAACTTTGGAGAAGCCGGCCATGTTTGCTTTCTGTTTGAAACCTAGGGGTCTGGAATCACTTAACAAGGGATTGAAACACCGGTCCCAAAAGAAGATTTCAGTCTCTGGGCAAGCAAATAGTAATCCAGATCATGATGGGTTTCACACTTTCAGACGAAGACAGAATGCCTTGGCTTTTGGCGATGAGAAGTTCCTATACCAGGGCCACGGTTATGATTCTTTTGATGATTCATCTATGGCTATGAACTCACCAAGGGTTTACTTACCCCGTGATGCTGGGAACTTGAAATACCATCCTACAAGTAATGGAGTGGGATGTAGAAATCATATCCCAAAATTTCAGGAGTCCAGATACGATCTGCATGGCAACGGGCATCACCTTCCTGCTGTCCCTAAGAGGCAAGGTAATGAACAGTTGGAAGCTTCAGTCCTTGAGGAGTTAAGGCTGCGTGATGCAGTGGCTGAGGCTCATCATAAACGTCATCTGGCTAACTTGAAGAAAGAGAGGGCTAAAAGATTGCTGTATAAAGCAGATGTAGCAATTCACAAGGCTGTGACTGCTCTAATGACTGCAGAAGCAATGAAAGCTTCTGAGGAGTCTCTTGATGAAACGAAAGCTTCAGAGGACTAA 4755 0.4034 MEGRVENSNGATIPKKSRSLDLKNLYKSKLTEETAKKYLKRISSSSGGGDEKRKKKKARKEVSLSNLENGDGSSELKLGVSQILSNDSMLYRVSFSVGGADVQIPKRKRSFVGRKKSELGQTSNLVEQPSRNIGYGDQVPNLGSDDLGKGVESFKIKHKKEFDEFKENRNSDSNSVQHFKENGDRASHSVVNSGDSSLTKSRRKNRKRKTLAFERSKVSKEAEPLVSSCKISDDLQDEEENLEENAARMLSSRFDPSCTGFSNKGSNGLFFFQSSCQSIVNHGLKSQSGSESASADTDGRVLRPRKQYKNKGNSRKRRHFYEILLGDVNAYWVLNRRIKIFWPLDQSWYHGLVDDYDEGNKYYHIKYDDRDEEWVNLHTERFKLLLLRSEVPGIAKGGGAFMKRRSSDHQKKSKFRKERQRTEENTEDDRCGGSSMDSEPIISWLARSSHRLGSSFQGSKKQKTSVAPLSFLYDEPVTAKGYLAKSSSRGVKNNLSGGSVSQDKLSDGFREKSSLQSTTCIKDGKQPIVYFRRRIRKPAPISPHISEENHAIISASGSVSYDHMFGGVENMKDQSDSRVEIEGPLFFTFKAGVSKLFWDMESVSFKFHLNFPTRLVLTDYFQSENLWLLYTVLLLQYGTIMTKWPRVCLEMLFVDNVVGLRFLLFEGCLNMAAAFVFYVLRVFHQPARQGKYVDFQFPSTSIGFKFSSVHVFKKPLVFEFYNFFEVKNSKWMCLDSKFKRHCLFSKQLHLSECTYDNIQALQNESSGFSITSISGSSSVKVQKRSRQGINIMGVSKLSTQADTHQYFDAGERELPPFALSFAAAPTFFLCLHLKLLLEQSATRVNFYDQEDPSLMADGCTSTNECSNRNSEIILRKDMEILSNGVATDGRSCADSDCPSTFSDQILSQNYKNIGLNSAGISISHGSERLGTTHLLEWQSHHLGQELGSLPSSSIISQDKADDGSHSFICDLSIQIPAVDQFEKTGDGDLCDTKHSPDFSCNINGGIIPRSNPTARRSSWYRNRNSSLSLGFQSHAWSEDFSNGPRKPRTQVSYSVPSAGYEFSSRQKNLHQKGLPHKRIRKASEKKSSEVARGLEKHFECLSCGANVLITLGDKGWRESGAHVVLELFDNNEWRLSVKLLGITRYSYKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWALFKEMHEECYNRNIRAASVKNIPIPGVHLIEENDDNGCEATFVRSGKYFQQVETDVEMALDPFRVLYDMDSEDEQWVSNAQNSQKDNSDLSWISEEMFEKTIDMFEKVAYAKKRDHFTPNEIEELMVNVGPLCVVKIIYDYWQQRRQKKGMALIRHFQPPLWEIYQKQVREWEIAMTKNTAPSNGFLDKVTTLEKPAMFAFCLKPRGLESLNKGLKHRSQKKISVSGQANSNPDHDGFHTFRRRQNALAFGDEKFLYQGHGYDSFDDSSMAMNSPRVYLPRDAGNLKYHPTSNGVGCRNHIPKFQESRYDLHGNGHHLPAVPKRQGNEQLEASVLEELRLRDAVAEAHHKRHLANLKKERAKRLLYKADVAIHKAVTALMTAEAMKASEESLDETKASED 1584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00573 1584 MobiDBLite consensus disorder prediction 488 503 - -
Cca05g00573 1584 Gene3D - 335 380 - -
Cca05g00573 1584 Pfam Enhancer of polycomb-like 1200 1291 IPR019542 -
Cca05g00573 1584 MobiDBLite consensus disorder prediction 398 437 - -
Cca05g00573 1584 MobiDBLite consensus disorder prediction 46 64 - -
Cca05g00573 1584 PANTHER PHD FINGER PROTEINS 2 1576 - -
Cca05g00573 1584 MobiDBLite consensus disorder prediction 488 511 - -
Cca05g00573 1584 Coils Coil 232 252 - -
Cca05g00573 1584 MobiDBLite consensus disorder prediction 166 209 - -
Cca05g00573 1584 MobiDBLite consensus disorder prediction 37 72 - -
Cca05g00573 1584 MobiDBLite consensus disorder prediction 284 313 - -
Cca05g00573 1584 PANTHER OS01G0179500 PROTEIN 2 1576 - -
Cca05g00573 1584 MobiDBLite consensus disorder prediction 166 185 - -
Cca05g00573 1584 MobiDBLite consensus disorder prediction 417 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00573 Cca-Chr5 13303203 13308934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00573 - - ccaj:109788833 3117.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00573 05 13303203 13308934 Cca03g01511 03 33721068 33726893 PCT