Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01511 ATGGAAGATAGAGAAGAGAACTCCCATGGAACTGAAATTCCCAAAAAATCGAGATCTTTGGATCTGAAGAGTTTATATAAATCAAAAGTGACAAAAGAGACTCCAAATAAGGGCTTAAAGAGGAAAGGGAGTCATCCTAGGGGTGTTGACGAGGATAGGATTAAGAAAAAGAAGACTAGAAAGGAAGTATCTCTGAGTAGCTTAGAGAATGCTGATGTTAGCATCAAGAAGGTTGCCGATGAAGAATATCAAAAAGGGCTTGGTTCTGGTAGACAGGATTTGTGTGAACAAAAGCAGGGATTGAGTGGCAGTACTGGGCTTAATAGAGGTTCACTAAGTTTTGATGGCAACGTTCACATTCCAAAGCGAAGAAGGGATTTTGTGGGGCGAAATAAATTTGAAGTTGGTCCAGCACAAAAACTGGCTGGGCAGCCTAGTAGTACAAGTAGCCATGGTGATCAAATGCCTAAGTTAACTAGTGATGATTTGGACAAGAAGATCGACTCTTCAAAGATTAAACTGAAAAGAGATTTTGATCAGTTTAAGGAAAGCAGGAGTAATTCTGCTGTAAATAGTGGTGATTCCTCTTTAAAGAAGTCACGGAAGAAGGATAGAAAGCAAAAGGCTTTGGCTCCATATAGAAATATTGTTGCCAAGGAGGATAAGCCTCTGATTGATGGCAGTAAAATATCTGATTATTTGCGGGAAGACGAGGAGGAGAATCTTGAAGAGAATGCAGCAAGGATGCTGTCATCACGGTTTGATCCAAATTATGCTGGGTTTTGTTCAAGCAGTAAGCCTTCTACATTGCCATCATCAAATGGTTTGTCCTTTTTGCTCTCTTCTAGTCGAAATATTGATAGTTGTGGatcaaagtcacagtcaggttcagaatcagcatcagTTGATACTGCTGGCAGAGTCTTGAGGCCAAGGAAACAATACAAAGAAAAAGGAAGTTCCCGGAAGAGGCGACATTTTTATGAAATTTCATTAGGTGATTTAGATGAACATTGGATACTGAACCAGAGAATCAAGGTTTTTTGGCCTTTGGACCAAATTTGGTATCATGGCCTTGTTGATGGCTATAACAATGAAACAAGGTGTCATCATATCAAATATGATGATCGAGAAGAAGAATGGATTAATCTCCAATCTGAGAGGTTCAAACTTCTGTTACTTCCAAGTGAAGTTCCTGGAAAAGCAGGAAAAAAAAGAGCAGCAAGGAAAAATAGAAGCTTGGTTCAGCAAAAAGAGAGCTTATCCAGCAAAGACAGGCAAGTAAGAGATGCAATTACTGAGGAAGATAGCTGTGGTGAAAGCTGTATGGACACAGAGCCTATAATATCTTGGTTGTCTCGATCTTCTCTTCGGTTTAAATCTTCTGCTTTTCATGGCACTAAGAAAAAGAAAACTTCAGTTACTCTTCCAAGTACATCCTCATCATTGTTATGTGATGTACCTGTAAAAGTACAGAGGTGCTTAGCTGAGAGTTCCCCAAGGGAAGGTAAAAGCAACCTTTCCAGAGATTCTGTATCTGAAGATAATCTAGGTGACAAATCTTGGAAAAAGTCTCCATTGCAAAGCTTCAGTTGCCCTAAAGATGTCAAGCAGCCTATTGTCTATTTTAGAAGGCGGTTTCGCAAGCCAACTCCAATATTACCACATATTTCTGAAGATAAACATGATAACACAACTGCATCTTGTTCCACATCCATTGATCCTGTGGTTGGTGGGCTTATGGATGCAAGAGAACCAAATGATGGGTGGTTTGAGACAGAGGGGCCTTTGCGGTTCACACATAATGCTGGTGTATCCAAATTTTTTTTGGACACAGCAGCATTCAAGTTTGACTTAAAATATCCAATAAAATTGGTGCTGAATGACTCGTTTAACTCGGAGAATTTGTGGTTGTTCCGTGCTATTCTGCTACTTCATTATGGTACAGTAATGACCTTGTGGCCAAGAGTTCACCTGGAGATGCTTTTTGTTGACAATGTGGTTGGGCTGAGGTTCTTATTATTTGAAGGCTGCCTGATGATGGCTGCAGCCTTTGTCTTTTGTGTCCTTAGGCTATTTCATCAACCTGTTGACCAAGAGATGTATATTGACTTGCAGTTGCCTGTTACATCTATCAGATTCAGGTTTTCAAGTGTTTATGGCATTAAGAACCCTCTTGTGTTTGCATTTTACAACTTCTCTAGAGTGAAGAATTCAAAATGGATGTATTTGGATTCAAAACTTAAAAGCCATTGCTTACTCAGTAAGCAGCTTCATCTCTCTGAATGCACGTATGATAACATCCAGGCACTTCAAAATCAATCAAGTGAGTATCCAATTACTTCCATCAGAGCCAGCCCCTTAGTCAAGGTCATGCAGAAGAGGACTAGGCCTGGTATTAATATTATGGGAGTTTCCAGAGAGTTGTCTCAGGCTGATACCAGTCAGTCTTCTGATGGTGGCAAGAGGAAGATTCCTCCATTTTCACTTTCTTTTGCTGCTGCACCTACATTTTTTCTTAGTTTGCATCTGAAGTTGCTGATGGAAAAATCAGTAGCTCATTTAAGCTTTTGTGAGGTAGAAGATCAGGAAGACTCTGGTCTGATGACAGATGACTGCTCTAGCATGGATGATTGCTCTAACCGGAATTCAGAGTTTAATGTGAAGAAAAATATGATGACTTTGTCAAAGGATGCTGTTCATGATGGATTGGCTTGTGCCGAGTCAGATTTGTTAATTAGTCCTTCTAATTGCAGTGATCGAATTCTCTCTTACCAGAATATTGATCTTACTGCTGATAGAACTTCTGGATTGGATGGTTCTGAGAGGCCTCCTACTGTTCAGTTACCTGAGTGGCAATCACGTCATTCTGATCACTCTTTTCCTTCAAATTCTTTAACTGACAAGATTAAAGCTGATGATGGTTCCCGTTCTTTTCTGTGTGATCTGAGTGTTCGAATTCCTTCTGCTGATCAATTTGAGAAACCTTGTGATGGTGATTTGGGTGATGCTCAACACTCTTCTGATCTTTCTTGGAATATAAATGGAGGTGTCATTCGCAGCCCCAATCCAACTGCTCCCAGAAGTTCTTGGCATCGGAACAGAAATAATTCCTCATCATTTGGTCTCCAATCACATGGGTGGTCTGTTGCCAAGGGTGATTCTCTTCACAATGGTTTTAGCAGTGGACCTAAGAAACCACGAACTCAAGTATCTTATTCAGTGCCTCTTTCTGGGTATGAGTATAATTCAAGACACAGAAGCCATTATCAGAAACAAAGAGGGTTGCCTCACAAGCGCATTAGAAAGGCTAATGAGAAGAAGTCATTGGATGTTGCTAGGAGTCCTGAAAAGAATTTGGAGTCCTTATCTTGCGATGCAAATGTGTTGATTACCCTTGGTGATAAGGGGTGGAGAGAATCTGGTGCCCGAGTTGTATTAGAATTGTTTGACCATAATGAGTGGAAACTTTCTGTAAAACTTGCAGGTATTACAAGGTATTCATACAAAGCACATCAGTTTCTACAGACTGGATCAACAAATCGTTACACTCATGCTATGATGTGGAAAGGAGGGAAGGATTGGATCTTAGAATTTCCTGATCGGAGTCAGTGGGCTGTTTTCAAGGAGATGCATGAGGAATGCTACAACCAGAACATCCGCGCTGCTTCAGTTAAAAATATACCTATTCCTGGTGTGGTCTTGATTGAAGAAAGTTATGATAATGAATCTGAAACTACTTTTATTCGGAGCTCTAAATATTTCCGACAAGTTGAAACAGATGTAGAGATGGCTCTGAATCCATTGCATGTCTTGTATGATATGGATAGCGAGGATGAGCAGTGGATTTTGACTATTCAAAATTCTGAAAAAGACAATGATTTCTTGGACAGGATCTCTGATGAGATGTTTGAGAAAACAATTGACATGTTTGAGAAGGCTGCATATGCTCAGCAGTGTGATCAGTTTACACCTACTGAAATAGAGGAACTAACAGTTGATGTCGGTCCCTTCTGTGTAACTAAAATCATTTATGAATATTGGCTGCAGAAAAGGCAGAAGAAGGGAATGCCTTTAATACGGCATTTTCAGCCACCTCTATGGGAAAGATATCAACATGAATTGAGAGAGTGGGAAGTAGCCATGACCAAGAATAATATTCCCATTTCTAATGGGTGCCTGGACAAGGTGTTGACTTTGGAGAAGCCGGCTATGTTTGCTTTCTGTTTGAAACCAAGGGGTTTGGAAGTACTGAACAAAGGATCAAAACATCGATCACAGAAGAAAATTTCAGTCTCAGGGCATTCAAACAGTATTCTGTATGAACAGGATGGATTCCACCCTTATGGTAGAAGATATGGATTAGCATATGGTGATGAAAAGTTTGCATACTCGGGGCATAATTATGATTATGTGGATGATTCCCCATTGCCTCAGACCTCCCCGATATTCTCACCAAGGGATGCTTGCAGCATGGGTTATTATTCTATTAACAATAGCTATGATAGAAATCATATCCCCAAATATAACAGACACAAGTCAAGGAAAATTGGCTCATTTGGGTTTCATAATGATTCACAGATGTCTTCTTATAGTCAGAGAGTTTCATGCTCAGGTAAGAGAAATGGGGATAGTAGGTGGAATGTGGGCTATTATGACATGGCAGGTCACAGGCAGTACCTGTTGGATGGCTCTACAAGACATGGAATTGAACAAATAGATCATCCAGACCTTGATGAGTTAAGAAAACGTGATGCCTCGGGAGCTGCTCAGCATGCAGCTAACATGGCCAAATTGAAGAGAGAGAGAGCTCAGAGATTGCTTTATAGAGCAGATCTTGCAATTCACAAGGCCGTGGTTGCTCTTATGACTGCTGAAGCAATGAAAGCTTCTGAGGATTCAAATGGTGATGGGTAG 4917 0.4013 MEDREENSHGTEIPKKSRSLDLKSLYKSKVTKETPNKGLKRKGSHPRGVDEDRIKKKKTRKEVSLSSLENADVSIKKVADEEYQKGLGSGRQDLCEQKQGLSGSTGLNRGSLSFDGNVHIPKRRRDFVGRNKFEVGPAQKLAGQPSSTSSHGDQMPKLTSDDLDKKIDSSKIKLKRDFDQFKESRSNSAVNSGDSSLKKSRKKDRKQKALAPYRNIVAKEDKPLIDGSKISDYLREDEEENLEENAARMLSSRFDPNYAGFCSSSKPSTLPSSNGLSFLLSSSRNIDSCGSKSQSGSESASVDTAGRVLRPRKQYKEKGSSRKRRHFYEISLGDLDEHWILNQRIKVFWPLDQIWYHGLVDGYNNETRCHHIKYDDREEEWINLQSERFKLLLLPSEVPGKAGKKRAARKNRSLVQQKESLSSKDRQVRDAITEEDSCGESCMDTEPIISWLSRSSLRFKSSAFHGTKKKKTSVTLPSTSSSLLCDVPVKVQRCLAESSPREGKSNLSRDSVSEDNLGDKSWKKSPLQSFSCPKDVKQPIVYFRRRFRKPTPILPHISEDKHDNTTASCSTSIDPVVGGLMDAREPNDGWFETEGPLRFTHNAGVSKFFLDTAAFKFDLKYPIKLVLNDSFNSENLWLFRAILLLHYGTVMTLWPRVHLEMLFVDNVVGLRFLLFEGCLMMAAAFVFCVLRLFHQPVDQEMYIDLQLPVTSIRFRFSSVYGIKNPLVFAFYNFSRVKNSKWMYLDSKLKSHCLLSKQLHLSECTYDNIQALQNQSSEYPITSIRASPLVKVMQKRTRPGINIMGVSRELSQADTSQSSDGGKRKIPPFSLSFAAAPTFFLSLHLKLLMEKSVAHLSFCEVEDQEDSGLMTDDCSSMDDCSNRNSEFNVKKNMMTLSKDAVHDGLACAESDLLISPSNCSDRILSYQNIDLTADRTSGLDGSERPPTVQLPEWQSRHSDHSFPSNSLTDKIKADDGSRSFLCDLSVRIPSADQFEKPCDGDLGDAQHSSDLSWNINGGVIRSPNPTAPRSSWHRNRNNSSSFGLQSHGWSVAKGDSLHNGFSSGPKKPRTQVSYSVPLSGYEYNSRHRSHYQKQRGLPHKRIRKANEKKSLDVARSPEKNLESLSCDANVLITLGDKGWRESGARVVLELFDHNEWKLSVKLAGITRYSYKAHQFLQTGSTNRYTHAMMWKGGKDWILEFPDRSQWAVFKEMHEECYNQNIRAASVKNIPIPGVVLIEESYDNESETTFIRSSKYFRQVETDVEMALNPLHVLYDMDSEDEQWILTIQNSEKDNDFLDRISDEMFEKTIDMFEKAAYAQQCDQFTPTEIEELTVDVGPFCVTKIIYEYWLQKRQKKGMPLIRHFQPPLWERYQHELREWEVAMTKNNIPISNGCLDKVLTLEKPAMFAFCLKPRGLEVLNKGSKHRSQKKISVSGHSNSILYEQDGFHPYGRRYGLAYGDEKFAYSGHNYDYVDDSPLPQTSPIFSPRDACSMGYYSINNSYDRNHIPKYNRHKSRKIGSFGFHNDSQMSSYSQRVSCSGKRNGDSRWNVGYYDMAGHRQYLLDGSTRHGIEQIDHPDLDELRKRDASGAAQHAANMAKLKRERAQRLLYRADLAIHKAVVALMTAEAMKASEDSNGDG 1638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01511 1638 PANTHER OS01G0179500 PROTEIN 2 1637 - -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 289 320 - -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 947 969 - -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 1 166 - -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 1 65 - -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 1018 1044 - -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 141 156 - -
Cca03g01511 1638 PANTHER PHD FINGER PROTEINS 2 1637 - -
Cca03g01511 1638 Pfam Enhancer of polycomb-like 1217 1313 IPR019542 -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 402 429 - -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 503 521 - -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 95 112 - -
Cca03g01511 1638 Gene3D - 341 388 - -
Cca03g01511 1638 Coils Coil 404 424 - -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 182 209 - -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 496 530 - -
Cca03g01511 1638 SMART TUDOR_7 337 395 IPR002999 -
Cca03g01511 1638 MobiDBLite consensus disorder prediction 933 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01511 Cca-Chr3 33721068 33726893 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01511 - - vun:114163981 2610.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00573 05 13303203 13308934 Cca03g01511 03 33721068 33726893 PCT