Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00519 ATGGTGATGGAGAATTGGAGAAGATGGTTTTGGGGGCACACCGACAAGTACGTTGTTAAGGTTAGCCAATTGAGGTTGCAATTTGGAGAAGCAAATGTGGGTGTTGATGCAAATGATGAAATAGCCATTCAGATTATGGGAATAGCTATGAAGAAACAAAAAGcttcatcttcttattcttattcttcaacttctAAAACCTCTCTTCCTTTTCATGCTACCCAGAAACTAGGATCCACTCACACTCACACCACTTTCCCCCAAAGATTCCTCAATTCTATGACTCCAACCCTCGTCTGGGACGCACGTGACCTCCACGACTTTAATCTCATCCTCAAACACGTGTCGGAAATTGGCACGTGCCACATGACATTTCATGTCTTATATGGAGAAGGCGATGTAGTAGAATATAAGCCTGAAATGGTGGTGGTTGGAGAGGTTTCCTTGAGCGTTACTATGACGGAATTGATGGTGGGGGAAGAGATGAAGAATGTTCAAAGAACACTTCCAATCCAATTGAAGGTGCATGGTTTGTTCATGGAAGCTACACTTTCGGTTTCATTGAGTTTATTGAAACTGGGGAATTATCACGATGACTTGCCGAGAACATTTGTAGACAAAGTGATAAGTCTTGTGGAGGTTGATCAAGTTGAGGAACCGAGTTCTTATGAATCAGACGAGTTAGCCGAATTTGACTCGGATGACTCATCTGATGAGTCCACCACAACCACAAGTAGTGACAGTAGCAGCAATAGCATTGTAATACACAATGCAGAGTCAAGAGTTACAAATGGGTCAGAGAGGTTTATGGACTCAGAGACAGAGACCCTTTTGGACACAATGCAGAGGAGTTGGTCCATGTTGCCATGGAGTAGAAGCTTCAAGGGATGGAGTTTTAAAAGAACCACCTCAAGGAAACAAGAGCCTTTGAACTCACATTTAAGTCATTGCATGGAACCACACTTTGATCACAAAAACTGTAGTTCAAATGGCTGGGAAAATAGGGAACTTTGGAGTAGAGATGCCCAAACAAGGGTCAAAACCAAAGTGTTTTTTGCTTCCTTTGATCAAAGGAGCAAAGAAGCTTGTGGTGAGAGTGCATGTACATCACTAGTTGTGTTCATAGCTCACTGGCTTCATTCCAACCATAACATGCCATCAAAGGAACAATTTGATAACCTTATCAAAAGGGGTTCCTCTGAATGGAAAAGGCTAAGCCACATTGATCACTACCTAAAGCTCTTCCCAGATAAGCATTTTGATCTAGACACAATCTTGGAAGCCAACATTAGGCCTCTAGTTGTTCTCCCTCGAAATTCCTACACAGGATTTTTCTCCCCTGAGAAATTTCAGTGCTTGGAAGGAGCCATGTCCTTTGATGACATTTGGGATGAGATAACAAGAGATGATGTGGTTGATCATGAGCCAAGAGTTTACATAGTGAGTTGGAATGATCATTTCTTTGTCTTAAAGGTGGAAGTTGATGCTTGCTATATTATTGACACTCTAGGGGAGAGGATTTTTGAGGGGTGCCAAAAGGCATTCATAATGAAGTTTGATGATTCAAGTTTGATGCATGAAAAGGGTGGCAGTAGTAAGGAAGAAAGTGTTGAGATAGTTTGCAATGGAAGAGAGTGTTGTAAAGAGTTCATCAAACGCTTTCTTGCTGCCATACCACTTAGGCAACTAGAAGAGGAGCAAAATAAAGGGACTGATTATAATCTTTATTTTCACAAGAAACTGCAGATTGACTTCCATTATAGCTTGTTATCATCCATGCCTTCAGCTTCTTCTTCTATTGGTGAACCTTTAAAATCCCATTTTATATAG 1830 0.406 MVMENWRRWFWGHTDKYVVKVSQLRLQFGEANVGVDANDEIAIQIMGIAMKKQKASSSYSYSSTSKTSLPFHATQKLGSTHTHTTFPQRFLNSMTPTLVWDARDLHDFNLILKHVSEIGTCHMTFHVLYGEGDVVEYKPEMVVVGEVSLSVTMTELMVGEEMKNVQRTLPIQLKVHGLFMEATLSVSLSLLKLGNYHDDLPRTFVDKVISLVEVDQVEEPSSYESDELAEFDSDDSSDESTTTTSSDSSSNSIVIHNAESRVTNGSERFMDSETETLLDTMQRSWSMLPWSRSFKGWSFKRTTSRKQEPLNSHLSHCMEPHFDHKNCSSNGWENRELWSRDAQTRVKTKVFFASFDQRSKEACGESACTSLVVFIAHWLHSNHNMPSKEQFDNLIKRGSSEWKRLSHIDHYLKLFPDKHFDLDTILEANIRPLVVLPRNSYTGFFSPEKFQCLEGAMSFDDIWDEITRDDVVDHEPRVYIVSWNDHFFVLKVEVDACYIIDTLGERIFEGCQKAFIMKFDDSSLMHEKGGSSKEESVEIVCNGRECCKEFIKRFLAAIPLRQLEEEQNKGTDYNLYFHKKLQIDFHYSLLSSMPSASSSIGEPLKSHFI 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00519 609 MobiDBLite consensus disorder prediction 219 237 - -
Cca05g00519 609 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 5 599 - -
Cca05g00519 609 PANTHER - 5 599 - -
Cca05g00519 609 MobiDBLite consensus disorder prediction 219 257 - -
Cca05g00519 609 MobiDBLite consensus disorder prediction 238 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00519 Cca-Chr5 11735452 11746904 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00519 - - gmx:100787458 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00519 05 11735452 11746904 Cca05g00519 05 11735452 11746904 ECH
Cca05g00519 05 11735452 11746904 Cca03g01573 03 34490258 34493904 PCT