Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01573 ATGTCGGCCATCAAGTGCTGGACTACGAGGTTGTCGGACAAACACGCCGTGAAGCTCACCCAAGTGAGGCTCGAATTGGGACTGTTCGGAGCCAGGTCGGTCGCTGCAAACGACAAGGTCGCTCTTCAAATAACGGGGATTGCCACCAAGAAAGGAAAGCCCAAAACGACACCGCTCTCGCTTAAACGACACACTCACACCACCTCGGCTCCTAGGTTCCTCACTTCCAAATCGTCCTCTCTCGTGTGGGACACGCGCGACCTCTGCGCTTTTCATCTCCTCACAGACGCCTCCCTCCATGTTTGCCACATCGCATTTCATGTCTTATATGGAGGAGAATCCAAAGGCAAAATGACGGTGGTCGGAAAAGTGGAAATGAGCGTTGCCGTGGCGGAGGTCGTGGCCGGAGAGGACAAGAAGACGGAGTCCAATTCTCATCATCGTCACTTTCAGAGAAGGCTTCCAATCAAATTCAGGGTCAATGGTTTATGCATAGAAGCTACCCTTTTGGTCTCTTTAAAGTTATTGAAGCTAAGAGATTCAAATGGTGACTCAACGTCAGCAACACCCTTTGAAAATCGTGTCAAATCACAAAAGAAACGTGGAATTATAGAGAAAGTATTGTATTTGACAAGCTTGGGGAAGAAAAACAATGGCAAGTTTGATGAAGCGGAAGAAACGAGTCCTTATGAGTCGGATAGCTCTCCCGTGTTTGACTCGGATGACTCGAACAAGTCCTCCACAAGCAGTGGTAGTAGCAAGAGTGGTGGAATCCACAATGCACGCTTAACACTAACAGATAGGTCTGAGAGGCTTACAAGCTCAGAGACAAAGACTCGTTTGAGTTCGTCCCAGTTGCCACGAAATAGAAGCCTCAATGGATGGAACATTAGGACAACCACTAACAAACAAGAAAACATAGCTTCCTATCCTAGTCCTTTCATGAAATCAGATAAACTTTCTCCGCAATTAAACCATAAAGATGGTGCACGAAGTTGGGAATACAGGGAGATTTCAAGTAGAGATAGGCAAGCAAAGCTCAAAACCAATGTGTTTTTCGCTTCCTTTGACCAAAGGAGTGAACAAGCTTCTGGTGAGAGTGCATGCACGGTTTTAGTTGCGCTCATAGCTCACTGGCTCCATTTCAACCATGATATGCCAACAAGAGCGCAATTTGATAGGCTCATCACACAAGGTTCATCTGAATGGAGAAGGTTGTGCAACAATGATTACTACTCTCAGCTCTTCCCAGATAAACATTTTGATCTAGAGACAATCATAGAAGCCAATGTGAGACCTCTGGTTGTTCTGCCTCAGAAATCATACACAGGATTTTTCTCTCCTGAGAAGTTCCAATGCTTGAAAGGAGCCATGTCTTTTGATGGAATTTGGGATGAGATAAAGAGCAAAGTGTGTGATCAGGAGCCAATGATTTACATAGTGAGTTGGAACGATCATTTCTTTGTCTTGAAGGTAGAAGAAAACGCTTACTACATCATTGACTCTTTGGGGGAGAGACTTTCTGAAGGGTGTCAAAAAGCATTCATACTGAAGTTTGATGATTCGAGTGTGATGTATGGGAAAAAAGACAAGGCAAATGAGGTCCCTCCAAAGGGTGCAAGTCGTGAGATAATTTGTCGTGGAAAAGAGTGTTGTAAAGAGTTCATCAAACGATTTCTAGTTGCTATACCACTTTGGCAACTAGAGAAGGAGGAGAAGAAATGGAGTGTTTCAAGTCCTTATCTTCATCGACAATTGCAGATTGATTTCCATTATAGCTCTTCATTATCATCGTCCACTTCAACTGATTCTTCTTTGTGGTCTCTCTTAACAAGTGAGTCTTGA 1845 0.4428 MSAIKCWTTRLSDKHAVKLTQVRLELGLFGARSVAANDKVALQITGIATKKGKPKTTPLSLKRHTHTTSAPRFLTSKSSSLVWDTRDLCAFHLLTDASLHVCHIAFHVLYGGESKGKMTVVGKVEMSVAVAEVVAGEDKKTESNSHHRHFQRRLPIKFRVNGLCIEATLLVSLKLLKLRDSNGDSTSATPFENRVKSQKKRGIIEKVLYLTSLGKKNNGKFDEAEETSPYESDSSPVFDSDDSNKSSTSSGSSKSGGIHNARLTLTDRSERLTSSETKTRLSSSQLPRNRSLNGWNIRTTTNKQENIASYPSPFMKSDKLSPQLNHKDGARSWEYREISSRDRQAKLKTNVFFASFDQRSEQASGESACTVLVALIAHWLHFNHDMPTRAQFDRLITQGSSEWRRLCNNDYYSQLFPDKHFDLETIIEANVRPLVVLPQKSYTGFFSPEKFQCLKGAMSFDGIWDEIKSKVCDQEPMIYIVSWNDHFFVLKVEENAYYIIDSLGERLSEGCQKAFILKFDDSSVMYGKKDKANEVPPKGASREIICRGKECCKEFIKRFLVAIPLWQLEKEEKKWSVSSPYLHRQLQIDFHYSSSLSSSTSTDSSLWSLLTSES 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01573 614 MobiDBLite consensus disorder prediction 276 293 - -
Cca03g01573 614 MobiDBLite consensus disorder prediction 230 263 - -
Cca03g01573 614 MobiDBLite consensus disorder prediction 218 293 - -
Cca03g01573 614 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 10 604 - -
Cca03g01573 614 PANTHER - 10 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01573 Cca-Chr3 34490258 34493904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01573 - - gmx:100790631 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01573 03 34490258 34493904 Cca03g01573 03 34490258 34493904 ECH
Cca05g00519 05 11735452 11746904 Cca03g01573 03 34490258 34493904 PCT