Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00517 ATGTCTCTGAAAGGCTCCATTTCGTCGGAGAATCTGGTGCTTCCGGTCTCCGATCCTCCCAAGGGCCAAGACCCCTACGCCCCCGACGACAAGCTCTTCAAAGGCTCCGCCTTCACCAAACGCGGTGCCTTCGCCGCCCTCTCTTACATGTCCTGCGCAGTTCTCTTGGTCATGTTCAACAAGGCTGCGCTCTCCTCTTATCGCTTCCAATCCGCCAACGTCATCACTCTTCTTCAGATGGTATGTTCATGTTGCTTTCTCTATTTATTGAGACGCTGGAGGATGATTTCTTTCTCAGCAAATGAGTCCTTACTTATATCAGATAACTCAACAAAATTTGTGTCATTGAAGACTTTGAAGCACACTCTTCCTTTGTCAGGAGCATATTTATTTTACATGTTAGTCACCATGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTACACAACTCTTAGGAGGACCACAGTGGTATTTACAATGTTTGTGGAGTTTGTTCTGGTGGGGCAGAGGTATACACGTTCTGTCATTTTCAGTGTCGGCTTGATTGTCTTTGGCGCATTTGTTGCGGGAGCACGGGATTTTTCTTTTGATGCTTATGGATATGCTGTTGTTTTCATGTCAAACATCGCCACAGCAATATATCTTGCAACCATAGCCCGCATTGGTTGGAAAACTAGTGGTCTTAATAGCTTTGGCCTTATGTGGTGCAATGGTATCATATGTGGACCAGTTTTACTCATCTGGACATTTGTTCGTGGTGACTTGAAGACAACACTCAATTTTCCATATCTCTTCTCACCTGGTTTTATCGTAATTTTGCTTTTTTCCTGCATATTGGCATTCTTCTTGAATTACTGTATTTTTCTCAACACAACTCTAAATTCAGCTGTGACGCAGACAATTTGTGGTAATCTGAAGGATCTATTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGGCTACCGTTTGATGTTTGGAACGTAATTGGGCAGTGTCTCGGTTTTACTGGATCTGGTTTATACGCCTACTACAAACTCATTGGCAAATAA 1050 0.4333 MSLKGSISSENLVLPVSDPPKGQDPYAPDDKLFKGSAFTKRGAFAALSYMSCAVLLVMFNKAALSSYRFQSANVITLLQMVCSCCFLYLLRRWRMISFSANESLLISDNSTKFVSLKTLKHTLPLSGAYLFYMLVTMESVRGVNVPMYTTLRRTTVVFTMFVEFVLVGQRYTRSVIFSVGLIVFGAFVAGARDFSFDAYGYAVVFMSNIATAIYLATIARIGWKTSGLNSFGLMWCNGIICGPVLLIWTFVRGDLKTTLNFPYLFSPGFIVILLFSCILAFFLNYCIFLNTTLNSAVTQTICGNLKDLFTIGLGWIIFGGLPFDVWNVIGQCLGFTGSGLYAYYKLIGK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00517 349 PANTHER BNAA08G30680D PROTEIN 14 349 - -
Cca05g00517 349 MobiDBLite consensus disorder prediction 1 22 - -
Cca05g00517 349 PANTHER SOLUTE CARRIER FAMILY 35 14 349 - -
Cca05g00517 349 Pfam Triose-phosphate Transporter family 52 341 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00517 Cca-Chr5 11711440 11722042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00517 18 285 Organic Solute Cotransporters AT2G13650 24.275 9.80e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00517 K15281 - gmx:100819763 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00517 05 11711440 11722042 Cca05g00517 05 11711440 11722042 ECH
Cca05g00517 05 11711440 11722042 Cca03g01577 03 34532728 34537558 PCT