Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01577 ATGTCTATGAAAGCGTCGTATTCGTCGGAGAATCTGATGCTTCCGGTATCGGATCCTCCGAATGAGGAAGACCGAGAGAGGCTTTTGAACGGCGATAATAAGACCTTCGGAGGACGAAGGGTTTATGCTGCCATCTCTTACATGTTATGTGCAGTTCTCTTGGTGCTGTTCAATAAAGCCGCTCTTTCGTCTTATCACTTTCCATCCGCAAGAGTCATCACGCTTCTTCAGATGGTATGTTCATGTTGTTTTCTTTATGTATTGAGGCGCTGGGGGGTAATTTCTTTCACAGCAGGCGAATCAGTAATTAAGGCAGATAACTCCAAAAAATTTGTGCCACTCAAGACTTTGAAGCACACTCTTCCCCTAGCAGGGGCATATTTACTTTACATGCTAGTGACCATGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTACACCACCCTTAGGAGGACTACAGTGGTATTTACGATGCTTGTAGAATATATGCTGGTTGGGCAGAGGTACACACCTCCTGTTGTTATCAGTGTTAGCTTGATTGTCTTCGGTGCATTTATTGCGGGAGCGCGGGATTTCTCTTTTGATGCCTATGGCTATGCCATTGTTTTCCTGTCAAACATCACAACGGCTATATATCTTGCAACCATAGCTCGTGTTGGTTGCAAAACTAGTGGCCTCAATAGCTTTGGCCTTATGTGGTGTAATGGTGTCATATGTGGACCTTTTTTGCTTATTTGGACATTAGTTCGGGGTGACTTGAAAATGACACTCCATTTTGCATACCTTCTTTCACCTGGTTTTCTTGTTGTTTTGCTCTTTTCTTGCATCCTCGCTTTCTTCCTGAATTACAGTATTTTTCTTAACACAACTCTCAATTCAGCTCTGACGCAGACAATATGCGGTAACCTAAAGGATCTGTTTACTATTGGCTTTGGCTGGATAATTTTTGGTGGGCTACCATTTGATTTTTGGAATGTAGTAGGACAATTTCTCGGTTTTGCCGGCTCTGGTTTATATGCTTACTATAAGCTCATTGGCAAATAA 1044 0.4262 MSMKASYSSENLMLPVSDPPNEEDRERLLNGDNKTFGGRRVYAAISYMLCAVLLVLFNKAALSSYHFPSARVITLLQMVCSCCFLYVLRRWGVISFTAGESVIKADNSKKFVPLKTLKHTLPLAGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEYMLVGQRYTPPVVISVSLIVFGAFIAGARDFSFDAYGYAIVFLSNITTAIYLATIARVGCKTSGLNSFGLMWCNGVICGPFLLIWTLVRGDLKMTLHFAYLLSPGFLVVLLFSCILAFFLNYSIFLNTTLNSALTQTICGNLKDLFTIGFGWIIFGGLPFDFWNVVGQFLGFAGSGLYAYYKLIGK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01577 347 Pfam Triose-phosphate Transporter family 49 339 IPR004853 -
Cca03g01577 347 PANTHER SOLUTE CARRIER FAMILY 35 26 347 - -
Cca03g01577 347 MobiDBLite consensus disorder prediction 1 25 - -
Cca03g01577 347 PANTHER BNAA08G30680D PROTEIN 26 347 - -
Cca03g01577 347 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01577 Cca-Chr3 34532728 34537558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01577 18 236 Organic Solute Cotransporters AT2G13650 24.454 2.80e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01577 K15281 - gmx:100778544 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01577 03 34532728 34537558 Cca03g01577 03 34532728 34537558 ECH
Cca05g00517 05 11711440 11722042 Cca03g01577 03 34532728 34537558 PCT