Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00506 ATGGGTTGGAGATACAAGGCAGGGTTGTTCCTCATAGCTACTGTGGTTATCATATGGGTCACGTCAGCTGAAGTCACCCAGGATATTTTTATAGATTACAAGCAGCCATTTGCAGTGACATATCTCGGAGCTTCTCTTATGGTAGTTTACCTCCCAGTAGCATTCATCAAGGACTTGTTGTGCAAATTAATTAAACACCACTCTTCTAAAAAAAATGCAAAAGTTGGGGTTGAGTTTTCTATCATGAGTTCTTCTCCTCTCAAGGGCAATGGAGTGCAGAAACACAATGAAGTAGAACTGGGGAGCGTGACTCGTAAAGATAGTGATCCAAACCTTTCAACACATGAAGAAGTAAAGCCATTGGTGGCTAAATATAATGATACTAATTTGATAAAGGCAGAGAAACAACTTACTACAAGGGAAATTGCTACTTATGGATTTTACATTGCACCTATTTGGTTTTTAACAGAGTATCTATCAAATGCTGCCCTTGCACGAACAAGTGTTGCAAGTACAACAGTATTGTCATCCACCTCAGGACTCTTCACTCTCTTCATTGGCGTGTTTATGGGCCAAGACACTTTAAATGTCGCAAAAGTAGTTGCTGTTTTGGTCAGCATGGCCGGGGTTTTGATGACAACTCTGGGGAAAACGTGGGCTGCAGATGACAAGCTATCAAATGCTTCCAATGGTCAGCGCTCTTTTGTTGGAGATCTTTTTGGCCTTCTCTCGGCCATGTCATATGGTCTATTTACAGTGCTTCTTAAAAAATTTTCTGGTGAAGAAGGAGAACGGGTTGATGTGCAAAAGCTGTTTGGATATATTGGATTGTTTACACTTTTAGCACTATGGTGGCTTATCTGGCCATTGTCAGCCTTAGGAATTGAACCCAAGTTTACGATTCCCCATTCGGTTAGATTGGACGAAGTGGTTCTTGCCAATGGATTTGTTGGAAGTGTTCTCTCAGACTACTTCTGGGCACTCTGTGTTGTATGGACAACTCCCCTTGTGGCCACTTTGGGCATGTCACTCACCATTCCTCTTGCTATGTTGGCTGACATGTTGATCCATGGCCGGCATTATTCAGCATTGTACATTCTTGGCTCACTTCAGGTATTTGCAGGCTTTGTGATAGCTAATATTTCAGAGTGTTTGACCATGAGGCTGGGATTATAG 1176 0.4218 MGWRYKAGLFLIATVVIIWVTSAEVTQDIFIDYKQPFAVTYLGASLMVVYLPVAFIKDLLCKLIKHHSSKKNAKVGVEFSIMSSSPLKGNGVQKHNEVELGSVTRKDSDPNLSTHEEVKPLVAKYNDTNLIKAEKQLTTREIATYGFYIAPIWFLTEYLSNAALARTSVASTTVLSSTSGLFTLFIGVFMGQDTLNVAKVVAVLVSMAGVLMTTLGKTWAADDKLSNASNGQRSFVGDLFGLLSAMSYGLFTVLLKKFSGEEGERVDVQKLFGYIGLFTLLALWWLIWPLSALGIEPKFTIPHSVRLDEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMLADMLIHGRHYSALYILGSLQVFAGFVIANISECLTMRLGL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00506 391 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 388 - -
Cca05g00506 391 PANTHER OSJNBA0070O11.5 PROTEIN 1 388 - -
Cca05g00506 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 135 217 - -
Cca05g00506 391 Pfam EamA-like transporter family 135 214 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00506 Cca-Chr5 11358094 11363463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00506 K15289 - gmx:100776833 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00506 05 11358094 11363463 Cca03g01592 03 34725041 34731929 PCT