Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01592 ATGGGTTGGAAATACAACGCTGGCTTGTTCCTCATAGCCACTGTCGTTATTATTTGGGTTACCTCTGCAGAAGTTACCCAGGACATTTTTACAGATTATAAGCAGCCATTTGCAGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCATTCATTAAGGACTGGTTCTGTAAATTACTTAAATGCCGCTCCTCTAAAAGTGGTAAAAATGCAGAATGCGTGGATGAGTTTTCTGTCAAGATTAGCTCTCCTCTCAAAAGCAATGGAACGCAGAAAAACTATGAACTGGAACTGGGGAGTGTAATTCGAAAAGATAGTGATTTAGACCTTTCAACACTTGCAGAAGTAAAGCCGTTAGTAGCTAAATATAATGATAATACTAATGTGCTAAAGGTGGAGAGAGAACTTACGGGGAAGGAAATCGCTGCTTATGGATTTTACATTGCACCTATCTGGTTTATCACAGAGTATCTATCGAATGCTGCCCTTGCACGAACAAGCGTTGCAAGTACAACAGTATTATCATCAACTTCGGGACTTTTCACTCTTTTCATTGGTGCATTTATGGGTCAAGATTCTTTAAATATAGCAAAAGTAGCTGCTGTCTTTGTCAGCATGGCTGGGGTTGTCATGACAACAATGGGAAAAACTTGGGCTGCAGATGAATCACAAATAAGTGATGCCAGTGGAAAGCACTCTTTAGTTGGAGATCTTTTTGGAATTCTCTCAGCTATGTCATATGGTCTATTTACAGTTCTTCTTAAGAAGTTTTCTGGTGAAGAAGGAGAAAGGGTTGATGTGCAAAAGCTGTTTGGGTATATTGGATTGTTTACACTTGTAGCACTGTGGTGGCTTGTCTGGCCATTGATGGCCTTAGGAATTGAACCCAAATTTACCATTCCCCACTCTGCTAAAGTTGACGAAGTGGTTCTTGCAAATGGATTTATTGGAAGCGTACTTTCAGACTACTTCTGGGCACTTTGTGTTGTATGGACTACTCCCCTTGTAGCCACTTTGGGTATGTCACTCACCATTCCTCTTGCTATGGTGGCTGACATGGTAATTCATGGTCGGCATTATTCAGCAGTATATGTTCTTGGCTCAGCTCAGGTATTTGCAGGCTTTGTAATAGCTAATCTTTCAGATTGGTTGACGAAGAAATTGGGATTGTAG 1185 0.4076 MGWKYNAGLFLIATVVIIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWFCKLLKCRSSKSGKNAECVDEFSVKISSPLKSNGTQKNYELELGSVIRKDSDLDLSTLAEVKPLVAKYNDNTNVLKVERELTGKEIAAYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDSLNIAKVAAVFVSMAGVVMTTMGKTWAADESQISDASGKHSLVGDLFGILSAMSYGLFTVLLKKFSGEEGERVDVQKLFGYIGLFTLVALWWLVWPLMALGIEPKFTIPHSAKVDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAVYVLGSAQVFAGFVIANLSDWLTKKLGL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01592 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 220 - -
Cca03g01592 394 Pfam EamA-like transporter family 138 217 IPR000620 GO:0016020|GO:0016021
Cca03g01592 394 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 393 - -
Cca03g01592 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 280 387 - -
Cca03g01592 394 PANTHER OSJNBA0070O11.5 PROTEIN 1 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01592 Cca-Chr3 34725041 34731929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01592 K15289 - gmx:100792013 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00506 05 11358094 11363463 Cca03g01592 03 34725041 34731929 PCT