Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00482 ATGTTCTCCCTCTCTTGCTTcctcccctcccccgaccctcaccccaacctcaccacctacacctaccacaccGAAAACGGCACCGTTTCGCTCACATGGTCACGCTCCATGCTCGGTCGCTCCCtcgacgtccacctccacaaccactcctctttccacatccgcatcAAGCCCTGGAGAAAACACGGCTCCAAAAAACTCTCCCACAACACCCTCTTCCTCTGGAACCTCTCCCACGCCAGGTTCGGGCCCGGCCCCGAACCCCGCTCCAGATTCTACCTCGCCCTCCTCGTCGACCACTCCCTCTCCCTCCTCGTCGGCGACCAGGCCCCCAAGCCCAAGCCCAACCCCAACAACACGCCAACTCACCAACGCCTCCTCCTCAAGCGCGACCACGTCCACGTGGCGCCGCAGTGCACCAGAGTGTACCAAACGAGAACGCGCCTCGGAGGTAAGACTAGAGAGTTCCGAATAGACTGCGAGGGTTacgagaacgagaacgagaacgagaacgagaGTTTGAGGCTCTTGTTCTGCGTGGACGAGGAGAAGGTTCTGGAAGTGAGGCGTCTCAAGTGGAAGTTCAGAGGGAGCGAGAGGGTGGAGATCCACGGGGCGCACGTGCAGATCTCGTGGGACGTGCACGACTGGCTTTTCGACAAGGACAAGGATCACCACGGCAACGAGGGGCACGCGGTTTTCGTCTTTAAGTTCGAGGAGGACGAGGTTGTGGGAGGTAGTAATAAGGAGAAGGAGGAGAGTGTGTGGGCGAGTCAGCAGCAACAGTGGAGTTTGGGGAGTAACAATGGCAAGAGTTGGTCTTCTTCCTCCTTGTCCGTTTCCTCTTCCGCTGGCTCCTTTGCCGGAACCTCCTCTGTCATGGAGTGGTCCAGTGTCGAGGAGAATGACTTGGTCGTTCCCCTTGGCTTTTCCTTGCTTGTTCATGCTTGGAGAAGCTGA 960 0.5042 MFSLSCFLPSPDPHPNLTTYTYHTENGTVSLTWSRSMLGRSLDVHLHNHSSFHIRIKPWRKHGSKKLSHNTLFLWNLSHARFGPGPEPRSRFYLALLVDHSLSLLVGDQAPKPKPNPNNTPTHQRLLLKRDHVHVAPQCTRVYQTRTRLGGKTREFRIDCEGYENENENENESLRLLFCVDEEKVLEVRRLKWKFRGSERVEIHGAHVQISWDVHDWLFDKDKDHHGNEGHAVFVFKFEEDEVVGGSNKEKEESVWASQQQQWSLGSNNGKSWSSSSLSVSSSAGSFAGTSSVMEWSSVEENDLVVPLGFSLLVHAWRS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00482 319 PANTHER OS08G0422401 PROTEIN 13 318 - -
Cca05g00482 319 Pfam Plant protein of unknown function (DUF868) 15 318 IPR008586 -
Cca05g00482 319 PANTHER EXPRESSED PROTEIN 13 318 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00482 Cca-Chr5 10668503 10670777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00482 16 237 EF-hand Containing Proteins AT5G28150 33.054 3.84e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00482 - - gmx:100806546 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00482 05 10668503 10670777 Cca03g01614 03 35036037 35038176 PCT