Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01614 ATGTCATCCCCTTTGCCTTCATGCTTCCGTCCATCTACCACAACCACCTCCAACCTGACCGTGTACCACACCGAAACAGGCCCCGTCTCCATCACGTGGTCCCGCTCCATGGTGGGACGCTCCCTCCACGTTGAGGTTCACCACGATGACTCCTTCGACTCCCTCTCCTTCCACCTTCACATAACACCCTTCCTCTTCTGGAAAAAACACGGCTCCAAGAAACTGGCCCCCAACACCCACCTCTTCTGGAACCTCTCCAAAGCCAAATTCTCCTCTTCCCCAGAGCCCCTCTCCGCCTTCTACGTCGCTCTTGTAGTTCACAACCGCATCACCCTCCTCCTGGGCGACTCCCCCAAAGAGGCCCACTCCAACTCCAAGGCCCACAGGCCCAACACCCCCCAGCTCCTCCTCCTCCAAAAGGAACACGTCTTTGCCGACACCCTCTACTCCACGCGCGCCGCTTTCGCCGGCAAGGCGCGTCTCATCCAGATCGACTGGGACCACTCCCGCCTCTCTTTCATCTTCGACGGGGAGACCGTTTTCCAGATTAAGCGCCTCAAGTGGAAGTTCAGGGGGAACCACCGTGTTCTGGTCGACGGCGTCCACGTCCAAATCTCCTGGGACATTTACAACTGGCTATTccacaaccacaaccacaaccacaacaacaacGCCCATGCTATCTTCATCTTCAAGTTCCAGCACCACGATGACCAAGATAGCAACTGGAATTTGGGGGCTTCGGAGTGGGCCAAAATGGGAAAGAGTTGCTCCTCTTCTTCCACTGGAAGCTTCTCCTCCGTCTTGGAATGGTCCAGTGTCGAGGAGAACCAACTCCTCGTTCCTGTCGGCTTTTCTCTCCTCGTTTACGCTTGGAAACGCTGA 885 0.5446 MSSPLPSCFRPSTTTTSNLTVYHTETGPVSITWSRSMVGRSLHVEVHHDDSFDSLSFHLHITPFLFWKKHGSKKLAPNTHLFWNLSKAKFSSSPEPLSAFYVALVVHNRITLLLGDSPKEAHSNSKAHRPNTPQLLLLQKEHVFADTLYSTRAAFAGKARLIQIDWDHSRLSFIFDGETVFQIKRLKWKFRGNHRVLVDGVHVQISWDIYNWLFHNHNHNHNNNAHAIFIFKFQHHDDQDSNWNLGASEWAKMGKSCSSSSTGSFSSVLEWSSVEENQLLVPVGFSLLVYAWKR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01614 294 PANTHER EXPRESSED PROTEIN 254 293 IPR008586 -
Cca03g01614 294 PANTHER EXPRESSED PROTEIN 10 242 IPR008586 -
Cca03g01614 294 Pfam Plant protein of unknown function (DUF868) 21 293 IPR008586 -
Cca03g01614 294 PANTHER OS08G0422401 PROTEIN 10 242 - -
Cca03g01614 294 PANTHER OS08G0422401 PROTEIN 254 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01614 Cca-Chr3 35036037 35038176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01614 29 293 EF-hand Containing Proteins AT5G28150 33.091 1.47e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01614 - - ccaj:109797309 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00482 05 10668503 10670777 Cca03g01614 03 35036037 35038176 PCT