Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00066 ATGGATAGAGAACAAGAAGAGATGCAATTTCTTGGGTTCTTTGGTGTGTACAAAGAATCCTCCAAGATCATACTCTCATGGAGGAGAATCTTCTCCCAAATCACCTTAACTCTAATCCTCCCTCTCTCCTTCATCTTCCTTATCCACATAGAGGTCTCCAACCTCCTATTCAGAAAGATTCTCTACAACTCAATAGTGATGGATGAAACAAATCCAAACACACCCCAATACAACAAGCTCTCCGACATGGTCTCTTCTGAATGGATCACCCTTGTGCTCTTCAAAATCGCTTACTTTACTTTGTTTCTCATATTCTCCCTCCTCTCTACCTCAGCAGTGGTCTACACCATAGCTTCAATTTACACATCAAAAGATGTTACATTCAAGAGGGTCATGAGTGTTGTCCCCAAGGTGTGGAAGAGGCTCATGTTGACCTTTTTATGTGCCTTTGCTGCTTTTTTTGCCTACAATTTTGTGACCATGATTGTTGTATTCATATGGGCAATTACAATTGGGGTAAATAGAGGTGGGTTATGGGTTTTGGTGTTGATAGGGGTGTTATACTTCATTGGGTTTGTGTACCTCACTATGGTGTGGCAACTAGCAAGTGTTGTGACCGTGTTGGAGGACTCATGGGGGATTAGGGCCATGGTGAAGGGCAAGGAGTTGATAAAGGGGAAGATGGTTTTGACCGTGTTCATATTTTTGACTCTTGTGGTTTCTTTTGTTTTGATAAGGGTTTTGTTTAAGGCCACGGTGGTGGATGGGTGGAGTGTGGGTTCTGTGGACAGAACAGCATATGGGATCCTTTGTTTGTTGCTCTTGTCTTGTTTGTTCCTATTTGGGCTTCTTCTTCAAACTGTGCTCTACTTTGTTTGCAAGTCCTATCACCATGAGAACATTGACAAATCGGCTTTGGCAGATCACCTTGAAGTGTATCGAGGAGAGTATGTGCCTTTGAAATCCAAGGATGTTCAGCTAGAGCAATACCAAGTTTGA 999 0.4254 MDREQEEMQFLGFFGVYKESSKIILSWRRIFSQITLTLILPLSFIFLIHIEVSNLLFRKILYNSIVMDETNPNTPQYNKLSDMVSSEWITLVLFKIAYFTLFLIFSLLSTSAVVYTIASIYTSKDVTFKRVMSVVPKVWKRLMLTFLCAFAAFFAYNFVTMIVVFIWAITIGVNRGGLWVLVLIGVLYFIGFVYLTMVWQLASVVTVLEDSWGIRAMVKGKELIKGKMVLTVFIFLTLVVSFVLIRVLFKATVVDGWSVGSVDRTAYGILCLLLLSCLFLFGLLLQTVLYFVCKSYHHENIDKSALADHLEVYRGEYVPLKSKDVQLEQYQV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00066 332 PANTHER PROTEIN, PUTATIVE-RELATED 1 330 - -
Cca05g00066 332 PANTHER OS08G0107100 PROTEIN-RELATED 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00066 Cca-Chr5 1445024 1446615 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00066 - - gmx:102660467 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00066 05 1445024 1446615 Cca05g00066 05 1445024 1446615 ECH
Cca05g00066 05 1445024 1446615 Cca03g01054 03 25603916 25606484 PCT