Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01054 ATGGACAGAGAAGAAGAAAAGATGCAACTTCTAGGGTTCTTTGGGGTTTACAAAGAATCCTACAAGCTCATATTTTCATGGAAGAAGATCTTCAGCCAGATAACcctcactctcatcctccctctctccttcatcttcctcatccacatccAAGTATCCAACACCCTCTTCGGCAAAATCGCACACGACACCGAGGACTTAACCGAAACCCCCCGTGACACACCCCAACACCAAAAGCTTCTCGACCTTATCTCCTCCGATTGGTCCACTTTCTTTCTCTTCAAACTCGTTTACTTCATTctcctcctcatcttctccctcctctccacctccGCGGTGGTTTACACCGTCGCTTCCTTCTACACCGCCAAAGAGGTTTCCTTCAACAAGGTCATGAGCGTCGTTCCCAGGGTCTGGAAGAGGCTCATGGTCACTTTCTTGTGCACCGTTGCTGCCTTCATCGTTTACAACGTTGTGGCAGGAGCGGTTACGCTCATGTTGGCTCTTACAATTGGTGTGAGAAACGTTGGTGCTGCGATTTTGTTGGTCATAGCGATTTTTTATCTAGTTGGGTTGGTTTACCTCACTGTGGTGTGGCTATTGGCCAGTGTTGTGACTGTGCTAGAGGATTCTTATGGGTATGAAGCGATGATGAAGATTTTTGTTCACGATGGTGGTGGTGAATGGAGGGGAGTTGTTCAGCTTAGGGTCGATGGACAGAACAATATATGGGATTGTGTGTTTCTTGCTGTTGTCTCATTTGTTCTTGTTGATGCTTGTTATCCAAACTGTTCACGGAACACTCAAATCTCACTCACTCTATCTCGTAGTCTCGCACGTCACGACGCACAACAAATAAACCAAAGCCCCAAATTGCTCAGCCTAGGAAATCTCCTGACTGAGTTCATTGTCAAGGGCAAGAATCAGATGCAAGTAACAGAATTAGAATTCTGGCAAGTTGTGAATCCTCTCTTCAGGCTTGGGTGGAAGCACTGGATTGGTGCAGCTGTTTTCATATGGGGTTGGATTCATCAACTCCAGTGCCATAAGATTCTTGTATGCATCATGTACTTGATTGACATCTAA 1086 0.4199 MDREEEKMQLLGFFGVYKESYKLIFSWKKIFSQITLTLILPLSFIFLIHIQVSNTLFGKIAHDTEDLTETPRDTPQHQKLLDLISSDWSTFFLFKLVYFILLLIFSLLSTSAVVYTVASFYTAKEVSFNKVMSVVPRVWKRLMVTFLCTVAAFIVYNVVAGAVTLMLALTIGVRNVGAAILLVIAIFYLVGLVYLTVVWLLASVVTVLEDSYGYEAMMKIFVHDGGGEWRGVVQLRVDGQNNIWDCVFLAVVSFVLVDACYPNCSRNTQISLTLSRSLARHDAQQINQSPKLLSLGNLLTEFIVKGKNQMQVTELEFWQVVNPLFRLGWKHWIGAAVFIWGWIHQLQCHKILVCIMYLIDI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01054 361 PANTHER OS08G0107100 PROTEIN-RELATED 1 219 - -
Cca03g01054 361 PANTHER PROTEIN, PUTATIVE-RELATED 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01054 Cca-Chr3 25603916 25606484 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01054 - - gmx:100817862 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01054 03 25603916 25606484 Cca03g01054 03 25603916 25606484 ECH
Cca05g00066 05 1445024 1446615 Cca03g01054 03 25603916 25606484 PCT