Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01074 ATGGTGAACAATAATGAGCCTCCAAGGCGTGTTGAGGGAAAATATGCTGCAATAGTAGTGTGCTGGCTTCTTGGCAACGGGTGTCTTTTCTCGTGGAACAGCATGCTGACTATAGAAGATTACTATGTTTTCTTGTTTCCGAAATACCACCCCTCGAGGGTGCTTACTCTTGTATATCAGCCATTTGCAGTTGGAACACTAGCAATACTGGCTTACAAAGAGGACAAAATCAATACAAGGTTGAGAAACCTATTTGGATATACTCTTTTCTTCATAAGTACTTTGTCGATTTTAGTTTTGGATTTAGTAACATCTGGTAAAGGAGGACTTGGAACTTTTATTGGAATATGCGTATTTAGTGCTGCATTTGGAATATCAGATGCTCACACACAAGGTGGAATGGTAGGAGACTTATCCTACATGCTTCCAGAATTCCTTCAGTCTTTCCTTGCTGGTGCAGCAGCATCAGGTGCACTAACATCTGCTTTGAGGTTGATTACAAAAGCAGCATTTAAGAATTCTAAGAACGGTCTTCGCAAAGGAGCCATTATGTTCTTTGCGATATCAACATTCTTTGAGCTTATTTGTGTTCTTCTTTATGCGCTTGTCTTCCCTAAATTACCGATTGTGAAGTACTACCGTTCAAAAGCAGCATCTGAAGGATCCAAAACTGTCTCAGCTGACCTTGCTGCAGGTGGCATCCAGACCCCATCTGGAACAGCCAATGAAGATGACAAACAATTAGAGCGCAAAGGAAATAAGCAACTGTTATGGGAAAACATTGACTATGCAATTGATTTGTTCCTAGTATATGCGCTTACACTGTCAATTTTCCCTGGATTCTTATCAGAAGATACCGGAACACACAGTTTGGGCACCTGGTATGCTCTTGTTTTAATTGCAATGTACAACGTGTGTGATCTGATAGGAAGATACATTCCACTCTTGAAAACCCTGAAGTTGGAGTGCCGAAAATTGATCACCATAGCAGTTGTTAGTCGCGTTTTGTTTGTGCCAGCATTTTATTTTACTGCAAAGTATGGCACACAGGGCTGGATGATAATGTTGACATCTTTCTTGGGGTTATCCAATGGTTACCTCACTGTTTGTATTCTCACTTCTGCTCCCAAAGGTTATAAGGGACCAGAACAAAATGCATTGGGAAACTTGCTGGTGTTGTTTCTTCTTGGAGGTATTTTTGCTGGGGTAACACTAGATTGGTTGTGGTTAATAGGTAAAGGGTGGTGA 1248 0.4103 MVNNNEPPRRVEGKYAAIVVCWLLGNGCLFSWNSMLTIEDYYVFLFPKYHPSRVLTLVYQPFAVGTLAILAYKEDKINTRLRNLFGYTLFFISTLSILVLDLVTSGKGGLGTFIGICVFSAAFGISDAHTQGGMVGDLSYMLPEFLQSFLAGAAASGALTSALRLITKAAFKNSKNGLRKGAIMFFAISTFFELICVLLYALVFPKLPIVKYYRSKAASEGSKTVSADLAAGGIQTPSGTANEDDKQLERKGNKQLLWENIDYAIDLFLVYALTLSIFPGFLSEDTGTHSLGTWYALVLIAMYNVCDLIGRYIPLLKTLKLECRKLITIAVVSRVLFVPAFYFTAKYGTQGWMIMLTSFLGLSNGYLTVCILTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01074 415 PIRSF ENT 3 413 IPR002259 GO:0005337|GO:0016021|GO:1901642
Cca04g01074 415 SUPERFAMILY MFS general substrate transporter 151 408 IPR036259 -
Cca04g01074 415 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 4 414 IPR002259 GO:0005337|GO:0016021|GO:1901642
Cca04g01074 415 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 4 414 IPR030200 -
Cca04g01074 415 Pfam Nucleoside transporter 124 409 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01074 Cca-Chr4 11994661 11998337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01074 4 413 Organic Solute Cotransporters AT4G05120 71.220 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01074 K15014 - gmx:100784933 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01074 04 11994661 11998337 Cca04g01074 04 11994661 11998337 ECH
Cca10g00781 10 9066311 9069289 Cca04g01074 04 11994661 11998337 PCT