Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00986 ATGGAGTTTCACTCTCTTCCCAAATTCCACCTtcttctcttctcttccattctcttccttTCAGCTTTCCACGCTCAGGCTAAAATCAAAGTCAACTACTGCGATAAGAAGGTGAACTATGCTGTGAAGGTGTCTGGAGTTGAAATATCACCAAACCCTGTGGTCAGTGGCGAGCCGGCTACCTTTAAGATCTCAGCTACTTCTGGTCAAGCTATTTATGGTGGAGAGGTGGTAATTGGAGTTTCATACGTTGGGGTGCCTGTTCATACTGAAAGAATTGATCTTTGTAAAGAAGTAGCCTGTCCTGTTTCTAATGGCAATTTCCTGATTTCTCACACCCAAACATTGCCTTCAATTACTCCACCGGGACCCTACTCTCTGAAGATGACACTGAAGAATGATCGTGACGAGGTTTTAACTTGCATCAAGTTTAATTTTAAAATCGTTCTTGGATCTTTTGTGTCTGATGTGTGA 474 0.4008 MEFHSLPKFHLLLFSSILFLSAFHAQAKIKVNYCDKKVNYAVKVSGVEISPNPVVSGEPATFKISATSGQAIYGGEVVIGVSYVGVPVHTERIDLCKEVACPVSNGNFLISHTQTLPSITPPGPYSLKMTLKNDRDEVLTCIKFNFKIVLGSFVSDV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00986 157 Gene3D - 27 150 - -
Cca04g00986 157 SMART pgtp_13 31 146 IPR003172 -
Cca04g00986 157 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 5 155 - -
Cca04g00986 157 Pfam ML domain 29 148 IPR003172 -
Cca04g00986 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 5 155 IPR039670 -
Cca04g00986 157 CDD PG-PI_TP 33 146 IPR033917 GO:0032366
Cca04g00986 157 SUPERFAMILY E set domains 29 149 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00986 Cca-Chr4 10659921 10663974 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00986 - - gmx:100500637 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00986 04 10659921 10663974 Cca04g00986 04 10659921 10663974 ECH
Cca10g00680 10 7567007 7570066 Cca04g00986 04 10659921 10663974 PCT