Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00973 ATGGCATCTCCAAACACAAACCAACAGAAAGAAGGGGTAGTTGGTCGAGTATTGGCCTTGTCAAAGGTTGTTAAGGAGAAGGTGTTGGGCATTTCTAGGTTAACAAAAGAGATAGCCCAAGATGATCCTAGAAAAGTGATTCATTCACTAAAAGTTGGTCTTTCAATCTCAATGGTTTCTCTATTATATTACTACCAACCACTGTACGAGAATTTTGGTCTTTCAGCAATGTGGGCTGTGATGACTGTTGTGGTTGTTTTTGAGTACACAGTCGGAGCCACTCTAGGAAAAGGTTTGAATAGGGCTATTGCAACGTTTGGAGCTGGTGCTCTTGGTGTTGGGGCTCATTACTTAGCTAGCCTAGCTGGAACAACAGGGGAACCCATATTGATTGGCACATTTGTCTTTGTGCAAGCTGCCATAGCATCATTTATAAGGTTTTTTCCGAAAGTGAAGGCAAGATATGATTACGGGATGCTTATATTCATCTTGACATTTTCTTTGATATCTGTATCTGGTTTTCGAGACGATGAGGTATTGGAAATGGCACACAAGAGGCTATTAACCATTGTTATAGGAGGTTCAGCTTGTGTGATGATTTCTATTTTTGTTTGTCCTGTGTGGGCTAGTGAAGAGTTCCACTATTCCATTGCTAACAAGTTGGAAATACTTGGTGACTTCTTGGAAGCTTTTGTACATGAATATTTTAAGATATCAAAAGAAGGAGAATCTGAAGACAACAAAGGAGACTTTAAAGACAAGTCGTTTTTAGAAGGTTATAAAAAGGTTCTCAATTCTAAAAGTAGTGATGACTCTCTGGTCAATTTTGCAAGATGGGAGCCAGGTCATGGAAAGTTCAAATTTCGTCATCCTTGGGACCTATACCTCCAAATTGGTGCCTTTTCTCGCCAATGTGCATATCGAATGGAAGCTCTAAATGCACACCTTAGTTCTGACATCCAAGGATCCCTTGAAATTCATTGCACCATCCAAGAGCTATGCTTGGAAATGAGTTTGGAATCTAGCAAAGCTTTGAAGGAACTAGGATCATCAATCAAAACAATGACTAGGTCATCTTCTTCAAATAGACATGTTGCAAATGCAAAAGTTATAGTGAAGAGCCTCAAGTCATTATTCCAATCAAGCTCATGGAATGAAACAGACCTTTTATCACTTATACCAGTTGTGACAGTGGCCTCACTACTTATTGATATTGTCGAATTCACAGAGAAAATAGCAGATTCAGTTAATGATCTTTCCACCCTTACACATTTTCGTATTGAAGATATAGATAAATCTCCAAAACCAAAACCATCACAATCTTCAAATTGTGAATGCATTGAATCGAGTCCTAAGACTGATAGCCTCCAACTTGTTATTCTTGTTGAGGAGTCAATGCTAGCTCTGTCAGAGAGTGAAAAATCAAACATAGTTTGA 1437 0.3876 MASPNTNQQKEGVVGRVLALSKVVKEKVLGISRLTKEIAQDDPRKVIHSLKVGLSISMVSLLYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRAIATFGAGALGVGAHYLASLAGTTGEPILIGTFVFVQAAIASFIRFFPKVKARYDYGMLIFILTFSLISVSGFRDDEVLEMAHKRLLTIVIGGSACVMISIFVCPVWASEEFHYSIANKLEILGDFLEAFVHEYFKISKEGESEDNKGDFKDKSFLEGYKKVLNSKSSDDSLVNFARWEPGHGKFKFRHPWDLYLQIGAFSRQCAYRMEALNAHLSSDIQGSLEIHCTIQELCLEMSLESSKALKELGSSIKTMTRSSSSNRHVANAKVIVKSLKSLFQSSSWNETDLLSLIPVVTVASLLIDIVEFTEKIADSVNDLSTLTHFRIEDIDKSPKPKPSQSSNCECIESSPKTDSLQLVILVEESMLALSESEKSNIV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00973 478 Pfam Aluminium activated malate transporter 37 420 IPR020966 GO:0015743
Cca04g00973 478 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 10 436 - -
Cca04g00973 478 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 10 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00973 Cca-Chr4 10370150 10402660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00973 26 421 Miscellaneous Gene Families AT1G08440 55.556 1.33e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00973 - - gmx:100813430 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00973 04 10370150 10402660 Cca04g00973 04 10370150 10402660 ECH
Cca10g00662 10 7256420 7258231 Cca04g00973 04 10370150 10402660 PCT