Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00916 ATGGTTTCAAGAGCAGCAATAGTGTTACTCATAGGTCTTCTGGGAATGTTTTACCAGGCCACTCAACTTCCCCCTCCAAACCGCCCTGACTCACCAAATGGTGTTCCAGCCTCACCAAGAGTCAGACTCAGTGATGGAAGGTACCTGGCTTATAGAGAAAAGGGTGTCCCCAAGGACCAAGCAAAACACAGCATCATCATTGTACATGGATTTGGAAGCTCCAAAGACATGAACTTTCTGGCACCCCAAGAGCTAATAGATGAACTGGGTATATATATTCTGCAATATGATCGTGCTGGTTATGGAGAAAGTGATCCAAACCCCAAACGCTCACTGAAAAGTGAAGCACTTGACATTGAAGAGCTTGCTGATCAATTACAGATAGGGTCAAAATTTTATGTGATTGGAGTCTCAATGGGATCATATGCTACTTGGAGTTGTTTGAACTACCTCCCCAACAGGTTAGCAGGTGTAGCTATGATAGCCCCAGTCATAAATTATCAATGGCCTTCCTTTCCTGAGAGATTGATAAAAGAGGACTATAGGAGGAAACTTATCAAGTGGACCATGTCCCTTGCAAACTATTTTCCTAAACTGTTGCACTGGTGGGTGACTCAGAAGTGGCTCCCTTCAAATTCTGTCATAGAAAAGAACCCAGCATTTTTCAACAAAAGAGATATAGATATTCTAGAGACAATTCCTGGCTTCCCAATGCTTACCAAGGATAAATTAAGGGAACAAGTTGTTTTTGACACTCTAAGGGGTGATTGGATGGTGGCATTTGGCAATTGGGAATTTGACCCATTGAAGCTAAGTAATCCATTCCCCCCAAATAGAACTTCAGCTCACATTTGGCAGGGCTATGAAGATAAGGTAGTGCCCTCTCAAATCCAGAGGTTTGTTACAGGGAAGCTGCCCTGGATACAGTATCATGAAGTTCCAGATGGTGGCCATTTGATTGTGCACTACAGTGGCTTATGTGAGGCCATTCTTAAAGCACTTTTACTTGGAGAAGAAAATCTTTCATATAGACCTAGACCAGAAGTATTTGTATCTTGA 1059 0.4259 MVSRAAIVLLIGLLGMFYQATQLPPPNRPDSPNGVPASPRVRLSDGRYLAYREKGVPKDQAKHSIIIVHGFGSSKDMNFLAPQELIDELGIYILQYDRAGYGESDPNPKRSLKSEALDIEELADQLQIGSKFYVIGVSMGSYATWSCLNYLPNRLAGVAMIAPVINYQWPSFPERLIKEDYRRKLIKWTMSLANYFPKLLHWWVTQKWLPSNSVIEKNPAFFNKRDIDILETIPGFPMLTKDKLREQVVFDTLRGDWMVAFGNWEFDPLKLSNPFPPNRTSAHIWQGYEDKVVPSQIQRFVTGKLPWIQYHEVPDGGHLIVHYSGLCEAILKALLLGEENLSYRPRPEVFVS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00916 352 Gene3D alpha/beta hydrolase 41 334 IPR029058 -
Cca04g00916 352 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 1 345 - -
Cca04g00916 352 Pfam Alpha/beta hydrolase family 65 320 IPR000073 -
Cca04g00916 352 SUPERFAMILY alpha/beta-Hydrolases 37 321 IPR029058 -
Cca04g00916 352 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00916 Cca-Chr4 9751324 9754257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00916 - - gmx:100803294 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00916 04 9751324 9754257 Cca04g00916 04 9751324 9754257 ECH
Cca10g00625 10 6820640 6827260 Cca04g00916 04 9751324 9754257 PCT