Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00513 ATGGCAAATCTGGTTCCTGGGGTGCTTCTAAAACTCATGCAGCACATGAACACGGATGTGAAGGTCACTGGTGAGCACAGGTCCTCTCTTTTGCAAGTGGTGAGCATTGTTCCAGCGCTTGCAGGGGGTGAGTTGTTCCCAAATCAAGGCTTTTACCTCAAGGTTTCTGATTCCCTTCATGCCACCTATGTCTCTCTCCCTGATGAACATGATGATCTCATCCTCAGTGACAAGATTCAACTGGGGCAGTTTGTTTTTGTGGATCGCTTGGAGGCAGCTTCACCAGTTCCTATTCTTCATGGGGTTAGGCCTGTTCCTGGGAGACACGCTTGTGTTGGAACCCCTGAGGACATTGTTGCAACAACTCACTCACTTGGCTTCCTTAGCAATGCTAAGGCTAACAAGAAAAGTGCTCGTTCTGGTCCCTTGGACTTATTAGAGAGGTCCAAGTCTCCTAGGAAAGTGTTGGAGAAGGAGAAGAAGGAGAAAGTGAGATTGACTAATGAAGAGCAATCAGACAAGAAACCAGTGCTTTTTGCCAAGAGTAAATCTCAGACAACAAAAGCTGTGGCTGATGTGAAGAAGGAATCATTGGGGAGATTGAAGTCCTTTAATTCAAGGGCTATTCCTTCTTCTCCTACTAGTTGCTACTCTTTGCCTACTTCTTTTGAGAAATTCGCCAATGGGGTGAAGCAGCAGGCAAATATCAAGGGAGTGGACAAGCTAACTGCTAAGGTCGGAGTGGTGGAGATGGGAAAGGGTGTGCGTGGAGCTAGTCCAACCGGGAAGAGAATTTCGGTCGGAAACCCGATCCGAAATTTGGTTCAGGGAATTGAGCTTGGAGCTAAGGCGCTCCGTAAGAGCTGGGAAGGGAATATGGAAGTCAAGACTAAAGAGACATCCAAATTAAGAGCTGCCAAGTGTGATCCTAAGCCTGAGGTCCGTGGCTCAACTCCTAGGAGAAGTACTTCAAGTGAAAAGTTACCCTCTAAAGAAGAGAGCAGGATGCAACCGCAGACAAAGTCCTCCAAGGAAGAGCACAGGACTCAAACATCTATAAAGAAAGTTATTGCCAATGGAACCACGGAAGAACAAGAAAAATCAAGTAAGCAAAGAGTTTCTGTTGGAAAGAAATCGTCAGATGTTTCTAACACTGGATTTCCTGGAAACTTGGTCAAAGTTTCTCCAAATAGTAGAAAAGTGACAGATGCAAGTGTTCAATGGACTTCACTGCCGTCATCTATTGCAAAGCTTGGGAGGGAAGTCATGAAGCACAGAGATGCAGCACAGATGGCAGCAACTGAAGCTATACAAGAGGCTGCCGCTGCTGAGAGTTTGCTGCAATGTCTAAGTGTATATGCAGAGCTAAGCAATTCTGCTAAGGAACTTAATCCGCAGCCTACAATAGAGCAGTTCTTAACTCTTCATTCTAGCCTCATTAGTGCGAGGATAAATGCTGACTCGCTAGCTAAATCCATTCCAGTTGATTCTTCTCCAGATAATTCTTCTCCAGATAATAATGAAAGAATCATAACAGAAGAGGCACTAAAACTCAAATCAGATAGACAAAAGCGTGCGAATTCTTGGGTCCAGGCTGCTTTATCCACCAACCTATCATCCTTTTCTGTTTATAACCGAGAACCTCTATCATCCAAGCTTCCAGTTTCAACCAATTCTCAGAACCAAAAGAACATCCTGGGAAGTCAAACAATGTTAGTCATAGAAAATTCAAGTGGAGATGCTGCATCAAAGTCTCATGGAAAAAGCCGTCAGACGACTAATTCCAAACCTGCCTTGCAAGGAACTCCTCGCAAAGCAAATGATGCATTGGCCAATGGACACAAGCAACTAGTCCAATCACCACCGTTGCAGTGGAATAGAGGAAATGGCTTTGATGAGGTGGTTAGTTTGGCTGACATGCTGCAACTGCGGTCACGAGATTGGTTCTTGGTGTTTGTTGAGAGATTCTTGGACACTGATGGGGACACTGGCTTGTCAAATAATGGCCAAATAGCGGGTATGCTCACACAACTGAAAAGTGTGAATGATTGGCTTGATGAGATAGGATCAAGCAAGAATGAGGGAGAACCATGCCAGATACCAGCAGATACAATTGACAGGTTGAGGAAGAAGATATATGAATATCTTCTTACACATGTTGAATCCGCTGCTGCGGCACTCAGTGGTGGATCACAGTCATCACCTAGAATCCAAACAGCAGAGATCAAAGCCAAAAAGTGA 2241 0.4485 MANLVPGVLLKLMQHMNTDVKVTGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSLHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEAASPVPILHGVRPVPGRHACVGTPEDIVATTHSLGFLSNAKANKKSARSGPLDLLERSKSPRKVLEKEKKEKVRLTNEEQSDKKPVLFAKSKSQTTKAVADVKKESLGRLKSFNSRAIPSSPTSCYSLPTSFEKFANGVKQQANIKGVDKLTAKVGVVEMGKGVRGASPTGKRISVGNPIRNLVQGIELGAKALRKSWEGNMEVKTKETSKLRAAKCDPKPEVRGSTPRRSTSSEKLPSKEESRMQPQTKSSKEEHRTQTSIKKVIANGTTEEQEKSSKQRVSVGKKSSDVSNTGFPGNLVKVSPNSRKVTDASVQWTSLPSSIAKLGREVMKHRDAAQMAATEAIQEAAAAESLLQCLSVYAELSNSAKELNPQPTIEQFLTLHSSLISARINADSLAKSIPVDSSPDNSSPDNNERIITEEALKLKSDRQKRANSWVQAALSTNLSSFSVYNREPLSSKLPVSTNSQNQKNILGSQTMLVIENSSGDAASKSHGKSRQTTNSKPALQGTPRKANDALANGHKQLVQSPPLQWNRGNGFDEVVSLADMLQLRSRDWFLVFVERFLDTDGDTGLSNNGQIAGMLTQLKSVNDWLDEIGSSKNEGEPCQIPADTIDRLRKKIYEYLLTHVESAAAALSGGSQSSPRIQTAEIKAKK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00513 746 MobiDBLite consensus disorder prediction 375 398 - -
Cca04g00513 746 MobiDBLite consensus disorder prediction 138 171 - -
Cca04g00513 746 MobiDBLite consensus disorder prediction 578 601 - -
Cca04g00513 746 MobiDBLite consensus disorder prediction 325 352 - -
Cca04g00513 746 MobiDBLite consensus disorder prediction 141 171 - -
Cca04g00513 746 PANTHER EXPRESSED PROTEIN 1 745 IPR010341 -
Cca04g00513 746 MobiDBLite consensus disorder prediction 293 398 - -
Cca04g00513 746 MobiDBLite consensus disorder prediction 293 316 - -
Cca04g00513 746 MobiDBLite consensus disorder prediction 578 606 - -
Cca04g00513 746 Pfam Plant protein of unknown function (DUF936) 4 727 IPR010341 -
Cca04g00513 746 PANTHER DUF936 FAMILY PROTEIN 1 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00513 Cca-Chr4 5004414 5009642 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00513 - - gmx:100805079 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00314 10 3349262 3354104 Cca04g00513 04 5004414 5009642 PCT