Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00511 ATGGCAAACCCCAAAGGCACCACCCGTGGCCTAGCATCTATTATTGTGATCATGACATTAATTCTCTCCAAAACTGCAGCACAAGTAGTAGCAAATAATGTGTCAAAACCCATTAAAATGAAGGACAATACTGTTAGAGTTGATCCATTTGATAATTTAAAAAAATACAGAGGAGGATTTGACATCACCAATGTGCACTATTGGACTTCAGTATTCTTCACAGGAATATTTGGATATGCAATTGGGGGGCTTTGGCTTTTGTTAGGAATTGTGTGTGGATTACTTTTTGTAATAAACAAATTTTGTTGCCAAAAAGATGGAGGAAGAAACACCAAGAAATGTCTTCCTTGTATTTGCAAGAGTTGTCATTTTTCGCCAATTCCTCTGATTATGTCACTCATCATATTAATTATGGTTGCTAGTGTGATAGTTTACATTGGGAGTGCAAAATTCTATTCTGAATCAAGGACTTCAGTTAAGGTTATAATCAAGATAGCAGCTGACGCGTCAGAAATCATACACAATGCAACAACAGCATTAGGACAAATCCAAAAAGCGTTGGTGGGATCCGGTATTAGTGAAGACATTTCTACAAAACTTAACTCTACGGCTAAGAAATTAGATAATGTTGTTGACAAAATCGTAAACATAACTACCAAAAATAGGCGCACTGTTAACAAGGCTTTCAAAGTAATGTTATTATTTCCTATTGTGATCGTAAGCTTGAATTTAGTTGCAGTACCATTTTTGTCAGTTTTTGGAGTAAAGATGTATTGGAAGCCATTTTACCTGCTTGTTATACTGTGCTGGTTGATGACGGCGTTGTGCTGGCTAATCTTTGGATTGTATTTCTTCTTGGCAAATTTTTCTAGTGATACGTGCACAGTTCTTTGCAACTTCGAAGAAAATCCCTATAACAACAGTCTAACCTTCATCCTCCCTTGTAATGAGTTGCGCTCAGCAAAATCAATTCTACATGAAATTGGTGCACGGTTCTCCATCCTTGTCAATGAGGTGAATGCAAACTTGGCGAATTTGATTCCAGATAATGTTACCCTGTGCAATCCTTTCACAGGACCACCTGAATATTTATATCAGACAGAGCATTGCCCACCTAATTCTTTTCAAGTAGGAGATATCCCAAAGGTATTGGAGCCTTATACTTGTTTTGATGATGAAAAATGTAGCAGTGAAGATTTATTAGTTGGTAGTGAATATAGGTTAATTGAGTCTTATGCAATGCCAATTCAGAGCCTACTGAATATGATTCCTTGGATGGATCACTTGATAGGATGCAGGTTGGTGAAAGATGCATTCTCTCAAGTCCTGGAGAAACACTGCAAGCCTTTGAAGAAATCTGCTCGGATGGCATGGATAGGTTTGGTGTTTCTTGCAGTGATGATGATGTTTTTAATTGTGTTATGGACAATCAAGGCTTGTCAAGATCACCACAGTTATCATCCTTCAGATTCTCCTGTGTAA 1482 0.3758 MANPKGTTRGLASIIVIMTLILSKTAAQVVANNVSKPIKMKDNTVRVDPFDNLKKYRGGFDITNVHYWTSVFFTGIFGYAIGGLWLLLGIVCGLLFVINKFCCQKDGGRNTKKCLPCICKSCHFSPIPLIMSLIILIMVASVIVYIGSAKFYSESRTSVKVIIKIAADASEIIHNATTALGQIQKALVGSGISEDISTKLNSTAKKLDNVVDKIVNITTKNRRTVNKAFKVMLLFPIVIVSLNLVAVPFLSVFGVKMYWKPFYLLVILCWLMTALCWLIFGLYFFLANFSSDTCTVLCNFEENPYNNSLTFILPCNELRSAKSILHEIGARFSILVNEVNANLANLIPDNVTLCNPFTGPPEYLYQTEHCPPNSFQVGDIPKVLEPYTCFDDEKCSSEDLLVGSEYRLIESYAMPIQSLLNMIPWMDHLIGCRLVKDAFSQVLEKHCKPLKKSARMAWIGLVFLAVMMMFLIVLWTIKACQDHHSYHPSDSPV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00511 493 PANTHER OS11G0264500 PROTEIN 25 491 - -
Cca04g00511 493 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 25 491 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00511 Cca-Chr4 4980485 4986439 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00511 - - pvu:PHAVU_011G052700g 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00310 10 3288880 3303735 Cca04g00511 04 4980485 4986439 PCT