Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02866 ATGACTGTCCTTCTGGCCGCTCTTGATTTTTGGGTAGTCAAGAATGTGAGTGGGAGGATTTTAGTTGGTATGAGGTGGTGGAATGAAATAAATGATTTGGGTGAGAGCGTTTGGAAATTTGAGTGTCTTGACCAGGAGTCATTGGCCCGGATGAACAAGAAAGATTCATGGCTTTTCTGGTGGACGCTTTACCTTACGGCAGTTGCATGGACTATACTGGCAATATTCTCGCTCATAAGGCTTCATGCTGATTACCTCCTAGTTGTAGGAGTTTGTTTGACTCTCAGTATTGCAAATATTGTTGGTTTTACCAAATGCCAAAAAGATGCTAAAAAGCGGATTCAACAATTTGCCTCTCGAACAATTGCCTCACGGGTCTCATCAACAATACAATCAGCATTCAGTGTTGTCTGA 414 0.4227 MTVLLAALDFWVVKNVSGRILVGMRWWNEINDLGESVWKFECLDQESLARMNKKDSWLFWWTLYLTAVAWTILAIFSLIRLHADYLLVVGVCLTLSIANIVGFTKCQKDAKKRIQQFASRTIASRVSSTIQSAFSVV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02866 137 Pfam Eukaryotic protein of unknown function (DUF846) 1 106 IPR008564 GO:0016021
Cca03g02866 137 PANTHER GOLGI APPARATUS MEMBRANE PROTEIN TVP23 1 137 - -
Cca03g02866 137 PANTHER UNCHARACTERIZED 1 137 IPR008564 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02866 Cca-Chr3 49963815 49966802 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02866 - - aprc:113861083 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02866 03 49963815 49966802 Cca02g01401 02 32498775 32505069 PCT