Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02823 ATGGCTCCTTCTTTCACTAACGTCAAAACCTTCTCTTCTCTCCTCCACCGATTCTCCAACAGCATCACCAGACGTGGGTACGCCATGGCATCACAAAACGCAACAAAGGGTGGAAGTGGAATGGCCTCTATGGCACCCAAGTCAGGGGAAGACAAAACTGTTTCTCCGTACAAGGTTTCGTGGGTGCCAGATCCTGTCACTGGATACTATAAGCCCGAGAACATCAACGAGATTGACGTTGCCGAATTACGGGCCAGGCTTCTTGGCAAAAAATCCAACAACAACTAA 288 0.4896 MAPSFTNVKTFSSLLHRFSNSITRRGYAMASQNATKGGSGMASMAPKSGEDKTVSPYKVSWVPDPVTGYYKPENINEIDVAELRARLLGKKSNNN 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02823 95 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2 1 93 - -
Cca03g02823 95 Pfam Late embryogenesis abundant protein 1 88 IPR004926 -
Cca03g02823 95 MobiDBLite consensus disorder prediction 29 57 - -
Cca03g02823 95 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 93 IPR004926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02823 Cca-Chr3 49574689 49575490 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02823 - - vun:114180105 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02823 03 49574689 49575490 Cca02g01241 02 30320623 30322590 PCT